Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 21 studies | 75% ± 19% | |
lung | 19 studies | 66% ± 17% | |
intestine | 14 studies | 48% ± 18% | |
kidney | 9 studies | 63% ± 17% | |
bone marrow | 6 studies | 47% ± 21% | |
lymph node | 6 studies | 66% ± 18% | |
heart | 6 studies | 38% ± 12% | |
liver | 6 studies | 59% ± 22% | |
pancreas | 5 studies | 50% ± 12% | |
uterus | 5 studies | 69% ± 24% | |
placenta | 4 studies | 73% ± 23% | |
eye | 4 studies | 34% ± 14% | |
prostate | 4 studies | 65% ± 16% | |
breast | 4 studies | 72% ± 5% | |
brain | 4 studies | 44% ± 14% | |
adipose | 3 studies | 41% ± 23% | |
adrenal gland | 3 studies | 55% ± 18% | |
esophagus | 3 studies | 60% ± 24% | |
skin | 3 studies | 51% ± 14% | |
thymus | 3 studies | 73% ± 20% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 17667.57 | 578 / 578 | 100% | 214.80 | 1155 / 1155 |
skin | 100% | 11368.10 | 1806 / 1809 | 100% | 167.86 | 472 / 472 |
uterus | 100% | 8168.27 | 170 / 170 | 100% | 213.06 | 458 / 459 |
kidney | 100% | 11086.49 | 89 / 89 | 100% | 159.57 | 899 / 901 |
breast | 100% | 13840.08 | 459 / 459 | 100% | 216.23 | 1114 / 1118 |
thymus | 100% | 9404.27 | 651 / 653 | 100% | 219.20 | 604 / 605 |
intestine | 100% | 8314.80 | 963 / 966 | 100% | 221.16 | 526 / 527 |
bladder | 100% | 7730.19 | 21 / 21 | 99% | 205.74 | 501 / 504 |
esophagus | 100% | 8159.20 | 1442 / 1445 | 99% | 211.93 | 182 / 183 |
stomach | 99% | 6354.60 | 354 / 359 | 100% | 208.62 | 286 / 286 |
prostate | 99% | 6740.72 | 243 / 245 | 99% | 135.53 | 498 / 502 |
ovary | 98% | 6038.58 | 177 / 180 | 100% | 223.72 | 430 / 430 |
adrenal gland | 100% | 7007.22 | 257 / 258 | 83% | 65.98 | 191 / 230 |
pancreas | 80% | 3886.35 | 264 / 328 | 99% | 297.69 | 177 / 178 |
liver | 79% | 4394.15 | 179 / 226 | 100% | 149.46 | 405 / 406 |
adipose | 100% | 15566.69 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 123.95 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 284.94 | 29 / 29 |
muscle | 100% | 47683.58 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 16030.82 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 198.02 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 158.27 | 1 / 1 |
blood vessel | 100% | 16875.88 | 1333 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 100% | 23802.38 | 925 / 929 | 0% | 0 | 0 / 0 |
heart | 100% | 42357.95 | 857 / 861 | 0% | 0 | 0 / 0 |
brain | 17% | 610.54 | 446 / 2642 | 51% | 42.34 | 357 / 705 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0070527 | Biological process | platelet aggregation |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005829 | Cellular component | cytosol |
GO_0016459 | Cellular component | myosin complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005515 | Molecular function | protein binding |
Gene name | MYL12A |
Protein name | Myosin light chain 12A Myosin light chain 12A (Myosin regulatory light chain MRCL3, isoform CRA_b) Myosin regulatory light chain 12A (Epididymis secretory protein Li 24) (HEL-S-24) (MLC-2B) (Myosin RLC) (Myosin regulatory light chain 2, nonsarcomeric) (Myosin regulatory light chain MRLC3) |
Synonyms | hCG_2045956 MLCB MRLC3 RLC MRCL3 |
Description | FUNCTION: Myosin regulatory subunit that plays an important role in regulation of both smooth muscle and nonmuscle cell contractile activity via its phosphorylation. Implicated in cytokinesis, receptor capping, and cell locomotion (By similarity). . |
Accessions | ENST00000583449.1 ENST00000217652.8 J3KT92 J3QRS3 P19105 ENST00000579226.5 ENST00000578562.6 ENST00000536605.1 J3KTJ1 ENST00000580887.5 ENST00000578611.5 |