Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 16 studies | 32% ± 12% | |
peripheral blood | 14 studies | 28% ± 8% | |
intestine | 8 studies | 23% ± 11% | |
kidney | 7 studies | 27% ± 4% | |
brain | 7 studies | 28% ± 11% | |
eye | 5 studies | 27% ± 8% | |
pancreas | 4 studies | 51% ± 16% | |
placenta | 4 studies | 40% ± 20% | |
uterus | 4 studies | 43% ± 15% | |
breast | 4 studies | 21% ± 2% | |
liver | 4 studies | 26% ± 8% | |
bone marrow | 3 studies | 22% ± 5% | |
lymph node | 3 studies | 28% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 7952.31 | 180 / 180 | 100% | 33.01 | 430 / 430 |
pancreas | 100% | 5945.57 | 328 / 328 | 100% | 42.20 | 178 / 178 |
thymus | 100% | 7604.05 | 653 / 653 | 100% | 68.23 | 604 / 605 |
skin | 100% | 5448.99 | 1808 / 1809 | 100% | 105.79 | 471 / 472 |
prostate | 100% | 6467.49 | 245 / 245 | 100% | 53.39 | 500 / 502 |
lung | 100% | 7791.51 | 578 / 578 | 100% | 37.24 | 1150 / 1155 |
liver | 100% | 4032.08 | 225 / 226 | 100% | 36.09 | 406 / 406 |
brain | 99% | 7563.45 | 2628 / 2642 | 100% | 40.77 | 705 / 705 |
kidney | 100% | 8248.60 | 89 / 89 | 99% | 47.81 | 895 / 901 |
bladder | 100% | 6256.67 | 21 / 21 | 99% | 43.56 | 499 / 504 |
stomach | 100% | 5995.23 | 359 / 359 | 99% | 29.36 | 283 / 286 |
intestine | 100% | 6039.40 | 966 / 966 | 99% | 33.87 | 521 / 527 |
uterus | 100% | 7645.64 | 170 / 170 | 99% | 40.14 | 453 / 459 |
breast | 100% | 5823.73 | 459 / 459 | 98% | 34.64 | 1101 / 1118 |
esophagus | 100% | 5276.46 | 1444 / 1445 | 98% | 20.81 | 180 / 183 |
adrenal gland | 100% | 6659.16 | 258 / 258 | 98% | 55.35 | 226 / 230 |
adipose | 100% | 5639.18 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 73.22 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 30.87 | 29 / 29 |
spleen | 100% | 6961.85 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 33.24 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 23.54 | 1 / 1 |
blood vessel | 100% | 8502.31 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 4113.95 | 799 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 10058.02 | 922 / 929 | 0% | 0 | 0 / 0 |
heart | 99% | 10527.23 | 851 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007165 | Biological process | signal transduction |
GO_0010916 | Biological process | negative regulation of very-low-density lipoprotein particle clearance |
GO_1900116 | Biological process | extracellular negative regulation of signal transduction |
GO_0048259 | Biological process | regulation of receptor-mediated endocytosis |
GO_0150093 | Biological process | amyloid-beta clearance by transcytosis |
GO_1900223 | Biological process | positive regulation of amyloid-beta clearance |
GO_0002091 | Biological process | negative regulation of receptor internalization |
GO_0032091 | Biological process | negative regulation of protein binding |
GO_1900222 | Biological process | negative regulation of amyloid-beta clearance |
GO_0005801 | Cellular component | cis-Golgi network |
GO_0005576 | Cellular component | extracellular region |
GO_0005886 | Cellular component | plasma membrane |
GO_0012505 | Cellular component | endomembrane system |
GO_0005796 | Cellular component | Golgi lumen |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0009986 | Cellular component | cell surface |
GO_0048237 | Cellular component | rough endoplasmic reticulum lumen |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005793 | Cellular component | endoplasmic reticulum-Golgi intermediate compartment |
GO_0005768 | Cellular component | endosome |
GO_0031904 | Cellular component | endosome lumen |
GO_0008201 | Molecular function | heparin binding |
GO_0048018 | Molecular function | receptor ligand activity |
GO_0001540 | Molecular function | amyloid-beta binding |
GO_0005102 | Molecular function | signaling receptor binding |
GO_0050750 | Molecular function | low-density lipoprotein particle receptor binding |
GO_0070326 | Molecular function | very-low-density lipoprotein particle receptor binding |
GO_0048019 | Molecular function | receptor antagonist activity |
GO_0005515 | Molecular function | protein binding |
GO_0035473 | Molecular function | lipase binding |
Gene name | LRPAP1 |
Protein name | LDL receptor related protein associated protein 1 Alpha-2-macroglobulin receptor-associated protein (Alpha-2-MRAP) (Low density lipoprotein receptor-related protein-associated protein 1) (RAP) |
Synonyms | A2MRAP |
Description | FUNCTION: Molecular chaperone for LDL receptor-related proteins that may regulate their ligand binding activity along the secretory pathway. . |
Accessions | ENST00000650182.1 ENST00000515119.5 P30533 ENST00000648517.1 D6REW6 A0A3B3IRQ7 |