Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 20 studies | 68% ± 21% | |
lung | 18 studies | 58% ± 14% | |
intestine | 13 studies | 51% ± 20% | |
kidney | 8 studies | 53% ± 17% | |
bone marrow | 6 studies | 45% ± 20% | |
lymph node | 6 studies | 62% ± 21% | |
liver | 5 studies | 51% ± 27% | |
placenta | 4 studies | 32% ± 10% | |
uterus | 4 studies | 55% ± 19% | |
breast | 4 studies | 39% ± 10% | |
prostate | 3 studies | 32% ± 4% | |
brain | 3 studies | 63% ± 27% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 4947.62 | 652 / 653 | 98% | 160.15 | 594 / 605 |
lung | 100% | 8562.13 | 578 / 578 | 96% | 143.20 | 1107 / 1155 |
intestine | 96% | 5426.09 | 928 / 966 | 98% | 242.38 | 517 / 527 |
stomach | 96% | 2729.17 | 345 / 359 | 98% | 227.39 | 280 / 286 |
kidney | 100% | 5779.75 | 89 / 89 | 91% | 161.09 | 820 / 901 |
bladder | 95% | 3392.76 | 20 / 21 | 94% | 189.57 | 476 / 504 |
esophagus | 91% | 1915.04 | 1322 / 1445 | 97% | 130.96 | 177 / 183 |
uterus | 85% | 1613.21 | 144 / 170 | 93% | 147.50 | 429 / 459 |
breast | 100% | 3252.15 | 458 / 459 | 78% | 67.46 | 871 / 1118 |
ovary | 74% | 1176.23 | 133 / 180 | 99% | 292.79 | 427 / 430 |
pancreas | 80% | 1912.49 | 262 / 328 | 93% | 194.59 | 165 / 178 |
skin | 76% | 1927.78 | 1369 / 1809 | 92% | 113.11 | 433 / 472 |
adrenal gland | 97% | 2266.99 | 249 / 258 | 49% | 34.89 | 113 / 230 |
prostate | 98% | 2672.91 | 241 / 245 | 26% | 12.97 | 131 / 502 |
liver | 64% | 1127.06 | 145 / 226 | 44% | 65.90 | 177 / 406 |
brain | 42% | 730.06 | 1101 / 2642 | 61% | 48.77 | 427 / 705 |
lymph node | 0% | 0 | 0 / 0 | 100% | 574.67 | 29 / 29 |
peripheral blood | 100% | 34074.10 | 929 / 929 | 0% | 0 | 0 / 0 |
spleen | 100% | 24199.34 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 40.57 | 1 / 1 |
adipose | 99% | 4312.20 | 1197 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 155.09 | 79 / 80 |
tonsil | 0% | 0 | 0 / 0 | 98% | 125.54 | 44 / 45 |
heart | 82% | 1628.34 | 704 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 78% | 2402.64 | 1045 / 1335 | 0% | 0 | 0 / 0 |
muscle | 7% | 80.78 | 59 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0050766 | Biological process | positive regulation of phagocytosis |
GO_0045730 | Biological process | respiratory burst |
GO_0006954 | Biological process | inflammatory response |
GO_0045087 | Biological process | innate immune response |
GO_0042554 | Biological process | superoxide anion generation |
GO_1903428 | Biological process | positive regulation of reactive oxygen species biosynthetic process |
GO_0051649 | Biological process | establishment of localization in cell |
GO_0034137 | Biological process | positive regulation of toll-like receptor 2 signaling pathway |
GO_0050665 | Biological process | hydrogen peroxide biosynthetic process |
GO_0051279 | Biological process | regulation of release of sequestered calcium ion into cytosol |
GO_0006801 | Biological process | superoxide metabolic process |
GO_0070254 | Biological process | mucus secretion |
GO_0032760 | Biological process | positive regulation of tumor necrosis factor production |
GO_1900426 | Biological process | positive regulation of defense response to bacterium |
GO_0070257 | Biological process | positive regulation of mucus secretion |
GO_0017004 | Biological process | cytochrome complex assembly |
GO_0032755 | Biological process | positive regulation of interleukin-6 production |
GO_0014895 | Biological process | smooth muscle hypertrophy |
GO_0035579 | Cellular component | specific granule membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0043020 | Cellular component | NADPH oxidase complex |
GO_0070821 | Cellular component | tertiary granule membrane |
GO_0030670 | Cellular component | phagocytic vesicle membrane |
GO_0030141 | Cellular component | secretory granule |
GO_0005768 | Cellular component | endosome |
GO_0009055 | Molecular function | electron transfer activity |
GO_0020037 | Molecular function | heme binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0016175 | Molecular function | superoxide-generating NAD(P)H oxidase activity |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0005515 | Molecular function | protein binding |
GO_0017124 | Molecular function | SH3 domain binding |
Gene name | CYBA |
Protein name | Cytochrome b-245 alpha chain Cytochrome b-245 light chain (Cytochrome b(558) alpha chain) (Cytochrome b558 subunit alpha) (Neutrophil cytochrome b 22 kDa polypeptide) (Superoxide-generating NADPH oxidase light chain subunit) (p22 phagocyte B-cytochrome) (p22-phox) Cytochrome b-245 light chain (Cytochrome b(558) alpha chain) (Cytochrome b558 subunit alpha) (Neutrophil cytochrome b 22 kDa polypeptide) (Superoxide-generating NADPH oxidase light chain subunit) (p22 phagocyte B-cytochrome) (p22-phox) (p22phox) Flavocytochrome b-558 alpha polypeptide |
Synonyms | |
Description | FUNCTION: Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide. . FUNCTION: Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide. . FUNCTION: Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide. . FUNCTION: Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide. . FUNCTION: Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide. . FUNCTION: Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide. . FUNCTION: Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide. . FUNCTION: Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide. . FUNCTION: Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide. . FUNCTION: Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide. . FUNCTION: Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide. . FUNCTION: Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide. . FUNCTION: Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide. . |
Accessions | A0A8Q3SIJ9 P13498 H3BR52 A0A8Q3WL14 ENST00000696157.1 H3BT77 ENST00000567174.5 Q86SL0 A0A8Q3WL27 ENST00000261623.8 A0A8Q3SIH4 A0A8Q3WLM1 ENST00000696161.1 H3BNP7 A0A8Q3WL26 ENST00000696159.1 H3BPX1 ENST00000568278.1 ENST00000565588.6 ENST00000566229.1 ENST00000696156.1 ENST00000569359.5 H3BPZ7 A0A8Q3SJ80 A0A8Q3WL20 ENST00000696163.1 ENST00000696162.1 ENST00000696160.1 ENST00000696158.1 |