Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 19 studies | 51% ± 15% | |
lung | 16 studies | 53% ± 16% | |
intestine | 10 studies | 58% ± 21% | |
brain | 9 studies | 29% ± 10% | |
kidney | 8 studies | 49% ± 15% | |
eye | 7 studies | 40% ± 15% | |
liver | 6 studies | 47% ± 23% | |
lymph node | 5 studies | 50% ± 15% | |
bone marrow | 4 studies | 38% ± 15% | |
uterus | 4 studies | 63% ± 15% | |
breast | 4 studies | 53% ± 10% | |
pancreas | 3 studies | 67% ± 19% | |
placenta | 3 studies | 60% ± 16% | |
adrenal gland | 3 studies | 37% ± 11% | |
prostate | 3 studies | 44% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 6244.62 | 258 / 258 | 100% | 147.16 | 230 / 230 |
esophagus | 100% | 5459.81 | 1445 / 1445 | 100% | 121.13 | 183 / 183 |
liver | 100% | 5758.04 | 226 / 226 | 100% | 138.89 | 406 / 406 |
ovary | 100% | 3590.82 | 180 / 180 | 100% | 184.69 | 430 / 430 |
uterus | 100% | 3671.76 | 170 / 170 | 100% | 112.44 | 459 / 459 |
thymus | 100% | 4831.29 | 652 / 653 | 100% | 127.61 | 605 / 605 |
brain | 100% | 5375.81 | 2637 / 2642 | 100% | 122.35 | 705 / 705 |
intestine | 100% | 5820.10 | 966 / 966 | 99% | 175.07 | 522 / 527 |
kidney | 100% | 6884.84 | 89 / 89 | 99% | 131.30 | 892 / 901 |
stomach | 100% | 4655.40 | 359 / 359 | 99% | 162.66 | 283 / 286 |
prostate | 100% | 4698.88 | 244 / 245 | 99% | 146.29 | 498 / 502 |
pancreas | 100% | 4104.04 | 328 / 328 | 98% | 89.76 | 175 / 178 |
skin | 100% | 4691.89 | 1808 / 1809 | 98% | 113.16 | 464 / 472 |
bladder | 100% | 4460.29 | 21 / 21 | 98% | 129.77 | 495 / 504 |
lung | 99% | 3055.36 | 573 / 578 | 98% | 79.46 | 1127 / 1155 |
breast | 100% | 3705.63 | 459 / 459 | 92% | 71.61 | 1034 / 1118 |
eye | 0% | 0 | 0 / 0 | 100% | 253.01 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 240.35 | 29 / 29 |
muscle | 100% | 13526.82 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 3706.44 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 125.45 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 167.22 | 1 / 1 |
adipose | 100% | 3925.64 | 1203 / 1204 | 0% | 0 | 0 / 0 |
heart | 100% | 10720.69 | 860 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 3656.20 | 1328 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 92% | 2585.56 | 856 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0033615 | Biological process | mitochondrial proton-transporting ATP synthase complex assembly |
GO_0015986 | Biological process | proton motive force-driven ATP synthesis |
GO_0046688 | Biological process | response to copper ion |
GO_0009060 | Biological process | aerobic respiration |
GO_0042776 | Biological process | proton motive force-driven mitochondrial ATP synthesis |
GO_1902600 | Biological process | proton transmembrane transport |
GO_0000275 | Cellular component | mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) |
GO_0005753 | Cellular component | mitochondrial proton-transporting ATP synthase complex |
GO_0005759 | Cellular component | mitochondrial matrix |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0005739 | Cellular component | mitochondrion |
GO_0043531 | Molecular function | ADP binding |
GO_0046933 | Molecular function | proton-transporting ATP synthase activity, rotational mechanism |
GO_0005515 | Molecular function | protein binding |
GO_0005524 | Molecular function | ATP binding |
Gene name | ATP5F1D |
Protein name | ATP synthase subunit delta, mitochondrial (ATP synthase F1 subunit delta) (F-ATPase delta subunit) ATP synthase F1 subunit delta |
Synonyms | ATP5D |
Description | FUNCTION: Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain . F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP turnover in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Part of the complex F(1) domain and of the central stalk which is part of the complex rotary element. Rotation of the central stalk against the surrounding alpha(3)beta(3) subunits leads to hydrolysis of ATP in three separate catalytic sites on the beta subunits . . |
Accessions | ENST00000591660.5 P30049 ENST00000395633.5 A0A087WTL3 ENST00000215375.7 ENST00000591249.5 |