Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 16 studies | 31% ± 12% | |
peripheral blood | 16 studies | 29% ± 8% | |
intestine | 8 studies | 32% ± 15% | |
kidney | 7 studies | 29% ± 6% | |
liver | 7 studies | 29% ± 21% | |
lymph node | 6 studies | 29% ± 10% | |
brain | 5 studies | 19% ± 3% | |
bone marrow | 4 studies | 25% ± 5% | |
uterus | 4 studies | 38% ± 13% | |
breast | 4 studies | 27% ± 6% | |
pancreas | 3 studies | 43% ± 15% | |
eye | 3 studies | 25% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2867.99 | 1445 / 1445 | 100% | 31.14 | 183 / 183 |
ovary | 100% | 2885.72 | 180 / 180 | 100% | 43.44 | 430 / 430 |
uterus | 100% | 2887.22 | 170 / 170 | 100% | 66.14 | 459 / 459 |
thymus | 100% | 2963.36 | 653 / 653 | 100% | 60.55 | 604 / 605 |
intestine | 100% | 2921.60 | 966 / 966 | 99% | 46.92 | 524 / 527 |
prostate | 100% | 2898.20 | 245 / 245 | 99% | 35.95 | 499 / 502 |
brain | 99% | 1379.49 | 2623 / 2642 | 100% | 28.83 | 704 / 705 |
kidney | 100% | 2247.07 | 89 / 89 | 99% | 26.03 | 890 / 901 |
adrenal gland | 100% | 2026.14 | 258 / 258 | 99% | 33.90 | 227 / 230 |
stomach | 100% | 2421.41 | 359 / 359 | 99% | 36.39 | 282 / 286 |
bladder | 100% | 2767.57 | 21 / 21 | 98% | 51.28 | 496 / 504 |
lung | 99% | 2250.43 | 575 / 578 | 99% | 42.84 | 1142 / 1155 |
pancreas | 100% | 1872.38 | 328 / 328 | 98% | 33.78 | 175 / 178 |
liver | 100% | 2923.27 | 226 / 226 | 98% | 32.23 | 399 / 406 |
skin | 100% | 2274.59 | 1809 / 1809 | 98% | 32.50 | 463 / 472 |
breast | 100% | 2739.30 | 459 / 459 | 98% | 32.98 | 1095 / 1118 |
eye | 0% | 0 | 0 / 0 | 100% | 31.86 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 58.64 | 29 / 29 |
muscle | 100% | 3129.97 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2810.08 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 55.00 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 64.95 | 1 / 1 |
blood vessel | 100% | 4313.55 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 2592.97 | 1203 / 1204 | 0% | 0 | 0 / 0 |
heart | 99% | 2062.74 | 852 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 86% | 1305.15 | 801 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0097191 | Biological process | extrinsic apoptotic signaling pathway |
GO_0046718 | Biological process | symbiont entry into host cell |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005737 | Cellular component | cytoplasm |
GO_0005164 | Molecular function | tumor necrosis factor receptor binding |
GO_0005175 | Molecular function | CD27 receptor binding |
GO_0005515 | Molecular function | protein binding |
GO_0001618 | Molecular function | virus receptor activity |
GO_0046872 | Molecular function | metal ion binding |
Gene name | SIVA1 |
Protein name | Apoptosis regulatory protein Siva (CD27-binding protein) (CD27BP) SIVA1 apoptosis inducing factor Apoptosis regulatory protein Siva |
Synonyms | SIVA |
Description | FUNCTION: Induces CD27-mediated apoptosis. Inhibits BCL2L1 isoform Bcl-x(L) anti-apoptotic activity. Inhibits activation of NF-kappa-B and promotes T-cell receptor-mediated apoptosis. . FUNCTION: Induces CD27-mediated apoptosis. Inhibits BCL2L1 isoform Bcl-x(L) anti-apoptotic activity. Inhibits activation of NF-kappa-B and promotes T-cell receptor-mediated apoptosis. . FUNCTION: Induces CD27-mediated apoptosis. Inhibits BCL2L1 isoform Bcl-x(L) anti-apoptotic activity. Inhibits activation of NF-kappa-B and promotes T-cell receptor-mediated apoptosis. . |
Accessions | B4DTY2 ENST00000347067.9 [O15304-2] ENST00000329967.11 [O15304-1] ENST00000535554.4 O15304 G3V439 G3V3U1 H0YJN1 ENST00000556195.2 ENST00000553810.5 ENST00000553819.5 |