Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 17 studies | 39% ± 19% | |
peripheral blood | 15 studies | 38% ± 14% | |
intestine | 10 studies | 33% ± 14% | |
kidney | 7 studies | 27% ± 7% | |
eye | 6 studies | 31% ± 13% | |
lymph node | 5 studies | 38% ± 6% | |
brain | 5 studies | 28% ± 8% | |
liver | 5 studies | 32% ± 16% | |
pancreas | 4 studies | 65% ± 18% | |
bone marrow | 4 studies | 28% ± 6% | |
uterus | 4 studies | 47% ± 17% | |
breast | 4 studies | 36% ± 7% | |
placenta | 3 studies | 27% ± 6% | |
prostate | 3 studies | 37% ± 13% | |
skin | 3 studies | 48% ± 18% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1815.48 | 1445 / 1445 | 100% | 215.31 | 183 / 183 |
ovary | 100% | 1513.50 | 180 / 180 | 100% | 59.53 | 430 / 430 |
uterus | 100% | 3115.13 | 170 / 170 | 100% | 250.78 | 459 / 459 |
prostate | 100% | 1821.36 | 245 / 245 | 99% | 40.76 | 499 / 502 |
brain | 99% | 1301.64 | 2626 / 2642 | 100% | 43.51 | 705 / 705 |
pancreas | 99% | 1141.77 | 326 / 328 | 100% | 38.07 | 178 / 178 |
skin | 100% | 872828.50 | 1809 / 1809 | 99% | 415.38 | 469 / 472 |
stomach | 100% | 1319.00 | 359 / 359 | 99% | 43.51 | 284 / 286 |
breast | 100% | 1799.59 | 459 / 459 | 99% | 62.60 | 1104 / 1118 |
adrenal gland | 100% | 1362.81 | 258 / 258 | 98% | 36.90 | 226 / 230 |
lung | 99% | 1403.33 | 571 / 578 | 99% | 88.88 | 1147 / 1155 |
thymus | 100% | 1795.46 | 653 / 653 | 98% | 35.93 | 593 / 605 |
bladder | 100% | 1443.67 | 21 / 21 | 98% | 115.35 | 494 / 504 |
intestine | 100% | 1423.31 | 965 / 966 | 98% | 43.01 | 517 / 527 |
kidney | 100% | 1455.38 | 89 / 89 | 96% | 28.79 | 868 / 901 |
liver | 98% | 1078.60 | 222 / 226 | 96% | 26.78 | 390 / 406 |
adipose | 100% | 2645.94 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 35.55 | 29 / 29 |
spleen | 100% | 1661.30 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 231.99 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 62.80 | 1 / 1 |
blood vessel | 100% | 2147.68 | 1332 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 1831.77 | 850 / 861 | 0% | 0 | 0 / 0 |
muscle | 98% | 1249.67 | 786 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 89% | 19.94 | 71 / 80 |
peripheral blood | 84% | 823.61 | 782 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0030216 | Biological process | keratinocyte differentiation |
GO_0018149 | Biological process | peptide cross-linking |
GO_0008544 | Biological process | epidermis development |
GO_0030855 | Biological process | epithelial cell differentiation |
GO_0045684 | Biological process | positive regulation of epidermis development |
GO_0045109 | Biological process | intermediate filament organization |
GO_0051290 | Biological process | protein heterotetramerization |
GO_0005615 | Cellular component | extracellular space |
GO_0005856 | Cellular component | cytoskeleton |
GO_0016020 | Cellular component | membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005882 | Cellular component | intermediate filament |
GO_0001533 | Cellular component | cornified envelope |
GO_0009986 | Cellular component | cell surface |
GO_0005829 | Cellular component | cytosol |
GO_0045095 | Cellular component | keratin filament |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0030280 | Molecular function | structural constituent of skin epidermis |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0005515 | Molecular function | protein binding |
Gene name | KRT10 |
Protein name | Keratin, type I cytoskeletal 10 (Cytokeratin-10) (CK-10) (Keratin-10) (K10) Keratin, type I cytoskeletal 10 (Cytokeratin-10) (Keratin-10) |
Synonyms | KPP |
Description | FUNCTION: Plays a role in the establishment of the epidermal barrier on plantar skin (By similarity). Involved in the maintenance of cell layer development and keratin filament bundles in suprabasal cells of the epithelium (By similarity). .; FUNCTION: (Microbial infection) Acts as a mediator of S.aureus adherence to desquamated nasal epithelial cells via clfB, and hence may play a role in nasal colonization. .; FUNCTION: (Microbial infection) Binds S.pneumoniae PsrP, mediating adherence of the bacteria to lung cell lines. Reduction of levels of KRT10 keratin decrease adherence, overexpression increases adherence. Neither protein has to be glycosylated for the interaction to occur. . |
Accessions | ENST00000269576.6 ENST00000635956.2 P13645 A0A1B0GVI3 |