Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 932.73 | 577 / 578 | 90% | 27.07 | 1040 / 1155 |
stomach | 91% | 420.77 | 325 / 359 | 78% | 19.97 | 223 / 286 |
thymus | 94% | 460.22 | 617 / 653 | 64% | 124.95 | 389 / 605 |
prostate | 89% | 338.47 | 219 / 245 | 68% | 11.69 | 342 / 502 |
uterus | 72% | 150.06 | 123 / 170 | 74% | 22.57 | 339 / 459 |
intestine | 68% | 864.70 | 655 / 966 | 77% | 16.34 | 405 / 527 |
breast | 69% | 197.96 | 318 / 459 | 74% | 24.31 | 830 / 1118 |
kidney | 58% | 248.87 | 52 / 89 | 76% | 26.24 | 683 / 901 |
esophagus | 53% | 154.43 | 767 / 1445 | 71% | 15.77 | 130 / 183 |
bladder | 62% | 398.86 | 13 / 21 | 62% | 14.25 | 312 / 504 |
liver | 77% | 156.84 | 173 / 226 | 46% | 10.11 | 187 / 406 |
skin | 37% | 66.51 | 663 / 1809 | 69% | 41.04 | 326 / 472 |
pancreas | 27% | 41.59 | 88 / 328 | 76% | 23.61 | 136 / 178 |
lymph node | 0% | 0 | 0 / 0 | 100% | 163.23 | 29 / 29 |
spleen | 100% | 4049.17 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 51.08 | 41 / 45 |
adipose | 88% | 316.99 | 1054 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 88% | 6001.15 | 813 / 929 | 0% | 0 | 0 / 0 |
ovary | 25% | 49.30 | 45 / 180 | 52% | 8.52 | 224 / 430 |
adrenal gland | 39% | 70.02 | 100 / 258 | 15% | 1.69 | 35 / 230 |
blood vessel | 46% | 143.52 | 613 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 23% | 6.59 | 18 / 80 |
heart | 21% | 41.45 | 183 / 861 | 0% | 0 | 0 / 0 |
brain | 7% | 12.76 | 191 / 2642 | 9% | 1.20 | 62 / 705 |
muscle | 2% | 2.87 | 14 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0042102 | Biological process | positive regulation of T cell proliferation |
GO_0097190 | Biological process | apoptotic signaling pathway |
GO_0007224 | Biological process | smoothened signaling pathway |
GO_0007169 | Biological process | cell surface receptor protein tyrosine kinase signaling pathway |
GO_0032753 | Biological process | positive regulation of interleukin-4 production |
GO_0019722 | Biological process | calcium-mediated signaling |
GO_0050850 | Biological process | positive regulation of calcium-mediated signaling |
GO_0010629 | Biological process | negative regulation of gene expression |
GO_0035739 | Biological process | CD4-positive, alpha-beta T cell proliferation |
GO_0046629 | Biological process | gamma-delta T cell activation |
GO_0031295 | Biological process | T cell costimulation |
GO_0010628 | Biological process | positive regulation of gene expression |
GO_0001954 | Biological process | positive regulation of cell-matrix adhesion |
GO_0033634 | Biological process | positive regulation of cell-cell adhesion mediated by integrin |
GO_0045879 | Biological process | negative regulation of smoothened signaling pathway |
GO_0046631 | Biological process | alpha-beta T cell activation |
GO_0050852 | Biological process | T cell receptor signaling pathway |
GO_0032743 | Biological process | positive regulation of interleukin-2 production |
GO_0065003 | Biological process | protein-containing complex assembly |
GO_0002250 | Biological process | adaptive immune response |
GO_0007186 | Biological process | G protein-coupled receptor signaling pathway |
GO_0042981 | Biological process | regulation of apoptotic process |
GO_0050731 | Biological process | positive regulation of peptidyl-tyrosine phosphorylation |
GO_0002870 | Biological process | T cell anergy |
GO_2000563 | Biological process | positive regulation of CD4-positive, alpha-beta T cell proliferation |
GO_0007172 | Biological process | signal complex assembly |
GO_0021549 | Biological process | cerebellum development |
GO_0032729 | Biological process | positive regulation of type II interferon production |
GO_0045059 | Biological process | positive thymic T cell selection |
GO_0002669 | Biological process | positive regulation of T cell anergy |
GO_0045060 | Biological process | negative thymic T cell selection |
GO_0016358 | Biological process | dendrite development |
GO_0042110 | Biological process | T cell activation |
GO_0007166 | Biological process | cell surface receptor signaling pathway |
GO_0001772 | Cellular component | immunological synapse |
GO_0009897 | Cellular component | external side of plasma membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0043197 | Cellular component | dendritic spine |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0042105 | Cellular component | alpha-beta T cell receptor complex |
GO_0005911 | Cellular component | cell-cell junction |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0044297 | Cellular component | cell body |
GO_0042101 | Cellular component | T cell receptor complex |
GO_0042106 | Cellular component | gamma-delta T cell receptor complex |
GO_0042608 | Molecular function | T cell receptor binding |
GO_0004888 | Molecular function | transmembrane signaling receptor activity |
GO_0019901 | Molecular function | protein kinase binding |
GO_0042802 | Molecular function | identical protein binding |
GO_0030159 | Molecular function | signaling receptor complex adaptor activity |
GO_0017124 | Molecular function | SH3 domain binding |
GO_0005515 | Molecular function | protein binding |
Gene name | CD3E |
Protein name | T-cell surface glycoprotein CD3 epsilon chain (T-cell surface antigen T3/Leu-4 epsilon chain) (CD antigen CD3e) CD3E protein T-cell surface glycoprotein CD3 epsilon chain |
Synonyms | T3E |
Description | FUNCTION: Part of the TCR-CD3 complex present on T-lymphocyte cell surface that plays an essential role in adaptive immune response. When antigen presenting cells (APCs) activate T-cell receptor (TCR), TCR-mediated signals are transmitted across the cell membrane by the CD3 chains CD3D, CD3E, CD3G and CD3Z. All CD3 chains contain immunoreceptor tyrosine-based activation motifs (ITAMs) in their cytoplasmic domain. Upon TCR engagement, these motifs become phosphorylated by Src family protein tyrosine kinases LCK and FYN, resulting in the activation of downstream signaling pathways . In addition of this role of signal transduction in T-cell activation, CD3E plays an essential role in correct T-cell development. Initiates the TCR-CD3 complex assembly by forming the two heterodimers CD3D/CD3E and CD3G/CD3E. Participates also in internalization and cell surface down-regulation of TCR-CD3 complexes via endocytosis sequences present in CD3E cytosolic region . . |
Accessions | P07766 E9PSH8 ENST00000361763.9 A0N2Z5 ENST00000528600.1 |