Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 19 studies | 47% ± 13% | |
lung | 17 studies | 58% ± 16% | |
brain | 12 studies | 34% ± 13% | |
intestine | 10 studies | 50% ± 23% | |
kidney | 9 studies | 57% ± 13% | |
eye | 8 studies | 48% ± 18% | |
bone marrow | 6 studies | 35% ± 12% | |
liver | 6 studies | 51% ± 21% | |
lymph node | 5 studies | 47% ± 10% | |
uterus | 5 studies | 56% ± 18% | |
pancreas | 4 studies | 67% ± 23% | |
placenta | 4 studies | 59% ± 16% | |
prostate | 4 studies | 43% ± 9% | |
breast | 4 studies | 50% ± 7% | |
heart | 3 studies | 36% ± 13% | |
adrenal gland | 3 studies | 53% ± 7% | |
esophagus | 3 studies | 61% ± 27% | |
skin | 3 studies | 44% ± 11% | |
thymus | 3 studies | 58% ± 17% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 2952.88 | 258 / 258 | 0% | 0 | 0 / 0 |
bladder | 100% | 2655.90 | 21 / 21 | 0% | 0 | 0 / 0 |
breast | 100% | 2576.24 | 459 / 459 | 0% | 0 | 0 / 0 |
esophagus | 100% | 3340.60 | 1445 / 1445 | 0% | 0 | 0 / 0 |
intestine | 100% | 3255.30 | 966 / 966 | 0% | 0 | 0 / 0 |
kidney | 100% | 4131.97 | 89 / 89 | 0% | 0 | 0 / 0 |
muscle | 100% | 4582.58 | 803 / 803 | 0% | 0 | 0 / 0 |
ovary | 100% | 1413.56 | 180 / 180 | 0% | 0 | 0 / 0 |
spleen | 100% | 1666.72 | 241 / 241 | 0% | 0 | 0 / 0 |
stomach | 100% | 2574.26 | 359 / 359 | 0% | 0 | 0 / 0 |
uterus | 100% | 1650.54 | 170 / 170 | 0% | 0 | 0 / 0 |
adipose | 100% | 2758.61 | 1203 / 1204 | 0% | 0 | 0 / 0 |
brain | 100% | 3750.61 | 2639 / 2642 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2907.39 | 1332 / 1335 | 0% | 0 | 0 / 0 |
pancreas | 100% | 1610.34 | 327 / 328 | 0% | 0 | 0 / 0 |
thymus | 100% | 1841.52 | 651 / 653 | 0% | 0 | 0 / 0 |
prostate | 100% | 2327.51 | 244 / 245 | 0% | 0 | 0 / 0 |
liver | 100% | 2354.33 | 225 / 226 | 0% | 0 | 0 / 0 |
heart | 100% | 6285.04 | 857 / 861 | 0% | 0 | 0 / 0 |
skin | 99% | 2013.19 | 1799 / 1809 | 0% | 0 | 0 / 0 |
lung | 99% | 1991.34 | 574 / 578 | 0% | 0 | 0 / 0 |
peripheral blood | 48% | 1145.45 | 444 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0015986 | Biological process | proton motive force-driven ATP synthesis |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0005753 | Cellular component | mitochondrial proton-transporting ATP synthase complex |
GO_0005739 | Cellular component | mitochondrion |
Gene name | ATP5MK |
Protein name | ATP synthase membrane subunit K, mitochondrial (ATP synthase membrane subunit DAPIT, mitochondrial) (Diabetes-associated protein in insulin-sensitive tissues) (HCV F-transactivated protein 2) (Up-regulated during skeletal muscle growth protein 5) |
Synonyms | USMG5 PD04912 DAPIT HCVFTP2 ATP5MD |
Description | FUNCTION: Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation . ATP5MK is a minor subunit of the mitochondrial membrane ATP synthase required for dimerization of the ATP synthase complex and as such regulates ATP synthesis in the mitochondria . . |
Accessions | ENST00000309579.7 ENST00000369811.5 ENST00000337003.4 ENST00000369815.6 ENST00000369825.6 Q96IX5 |