Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 19 studies | 45% ± 13% | |
lung | 17 studies | 49% ± 17% | |
brain | 13 studies | 33% ± 14% | |
intestine | 10 studies | 52% ± 21% | |
eye | 10 studies | 43% ± 20% | |
kidney | 9 studies | 55% ± 13% | |
bone marrow | 6 studies | 34% ± 15% | |
liver | 6 studies | 43% ± 21% | |
uterus | 5 studies | 49% ± 18% | |
lymph node | 5 studies | 52% ± 18% | |
pancreas | 4 studies | 50% ± 23% | |
placenta | 4 studies | 52% ± 24% | |
prostate | 4 studies | 38% ± 12% | |
breast | 4 studies | 46% ± 8% | |
heart | 3 studies | 30% ± 9% | |
adipose | 3 studies | 31% ± 10% | |
adrenal gland | 3 studies | 48% ± 6% | |
esophagus | 3 studies | 57% ± 26% | |
skin | 3 studies | 36% ± 15% | |
thymus | 3 studies | 66% ± 30% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 17219.76 | 180 / 180 | 100% | 1161.12 | 430 / 430 |
stomach | 100% | 32754.39 | 359 / 359 | 100% | 1060.67 | 286 / 286 |
esophagus | 100% | 34315.49 | 1444 / 1445 | 100% | 761.72 | 183 / 183 |
skin | 100% | 36200.90 | 1809 / 1809 | 100% | 1206.46 | 471 / 472 |
uterus | 100% | 19056.15 | 170 / 170 | 100% | 943.10 | 458 / 459 |
intestine | 100% | 42103.33 | 966 / 966 | 100% | 1259.37 | 525 / 527 |
kidney | 100% | 46303.02 | 89 / 89 | 100% | 1136.77 | 897 / 901 |
prostate | 100% | 19765.55 | 245 / 245 | 99% | 962.03 | 499 / 502 |
thymus | 100% | 26393.44 | 651 / 653 | 99% | 752.73 | 601 / 605 |
breast | 100% | 26279.64 | 459 / 459 | 99% | 878.60 | 1107 / 1118 |
bladder | 100% | 26919.33 | 21 / 21 | 99% | 998.25 | 499 / 504 |
lung | 99% | 23889.80 | 575 / 578 | 99% | 874.96 | 1147 / 1155 |
adrenal gland | 100% | 46653.47 | 258 / 258 | 99% | 1092.91 | 227 / 230 |
liver | 99% | 22516.48 | 223 / 226 | 100% | 803.64 | 406 / 406 |
pancreas | 98% | 13956.54 | 320 / 328 | 100% | 686.30 | 178 / 178 |
brain | 97% | 26146.92 | 2568 / 2642 | 100% | 887.71 | 704 / 705 |
adipose | 100% | 29347.80 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 1274.57 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 1097.60 | 29 / 29 |
muscle | 100% | 86118.39 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 24427.31 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 1185.00 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 394.46 | 1 / 1 |
blood vessel | 100% | 20676.93 | 1331 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 93292.77 | 846 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 96% | 23925.68 | 889 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0001525 | Biological process | angiogenesis |
GO_0006091 | Biological process | generation of precursor metabolites and energy |
GO_0098761 | Biological process | cellular response to interleukin-7 |
GO_0043536 | Biological process | positive regulation of blood vessel endothelial cell migration |
GO_0015986 | Biological process | proton motive force-driven ATP synthesis |
GO_0001649 | Biological process | osteoblast differentiation |
GO_0006754 | Biological process | ATP biosynthetic process |
GO_0006933 | Biological process | negative regulation of cell adhesion involved in substrate-bound cell migration |
GO_0042776 | Biological process | proton motive force-driven mitochondrial ATP synthesis |
GO_0051453 | Biological process | regulation of intracellular pH |
GO_0006629 | Biological process | lipid metabolic process |
GO_1902600 | Biological process | proton transmembrane transport |
GO_0045261 | Cellular component | proton-transporting ATP synthase complex, catalytic core F(1) |
GO_0005754 | Cellular component | mitochondrial proton-transporting ATP synthase, catalytic core |
GO_0005886 | Cellular component | plasma membrane |
GO_0042645 | Cellular component | mitochondrial nucleoid |
GO_0016020 | Cellular component | membrane |
GO_0005739 | Cellular component | mitochondrion |
GO_0031966 | Cellular component | mitochondrial membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0005753 | Cellular component | mitochondrial proton-transporting ATP synthase complex |
GO_0009986 | Cellular component | cell surface |
GO_0005759 | Cellular component | mitochondrial matrix |
GO_0045259 | Cellular component | proton-transporting ATP synthase complex |
GO_0005634 | Cellular component | nucleus |
GO_0046961 | Molecular function | proton-transporting ATPase activity, rotational mechanism |
GO_0046933 | Molecular function | proton-transporting ATP synthase activity, rotational mechanism |
GO_0042288 | Molecular function | MHC class I protein binding |
GO_0005524 | Molecular function | ATP binding |
GO_0043532 | Molecular function | angiostatin binding |
GO_0005515 | Molecular function | protein binding |
GO_0016887 | Molecular function | ATP hydrolysis activity |
Gene name | ATP5F1B |
Protein name | ATP synthase subunit beta, mitochondrial (EC 7.1.2.2) (ATP synthase F1 subunit beta) ATP synthase subunit beta (EC 7.1.2.2) ATP synthase subunit beta, mitochondrial |
Synonyms | ATP5B ATPMB ATPSB |
Description | FUNCTION: Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Subunits alpha and beta form the catalytic core in F(1). Rotation of the central stalk against the surrounding alpha(3)beta(3) subunits leads to hydrolysis of ATP in three separate catalytic sites on the beta subunits. . FUNCTION: Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Subunits alpha and beta form the catalytic core in F(1). Rotation of the central stalk against the surrounding alpha(3)beta(3) subunits leads to hydrolysis of ATP in three separate catalytic sites on the beta subunits. .; FUNCTION: Produces ATP from ADP in the presence of a proton gradient across the membrane. . FUNCTION: Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Subunits alpha and beta form the catalytic core in F(1). Rotation of the central stalk against the surrounding alpha(3)beta(3) subunits leads to hydrolysis of ATP in three separate catalytic sites on the beta subunits. .; FUNCTION: Produces ATP from ADP in the presence of a proton gradient across the membrane. . |
Accessions | ENST00000262030.8 Q0QEN7 F8W0P7 F8W079 ENST00000551570.5 ENST00000551020.5 H0YH81 H0YI37 ENST00000553007.2 P06576 ENST00000552959.5 |