Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 20 studies | 52% ± 15% | |
lung | 17 studies | 42% ± 11% | |
intestine | 12 studies | 35% ± 13% | |
kidney | 8 studies | 39% ± 11% | |
bone marrow | 6 studies | 31% ± 12% | |
lymph node | 6 studies | 46% ± 12% | |
liver | 6 studies | 43% ± 19% | |
pancreas | 5 studies | 33% ± 17% | |
placenta | 5 studies | 35% ± 19% | |
uterus | 4 studies | 52% ± 17% | |
breast | 4 studies | 46% ± 8% | |
adrenal gland | 3 studies | 32% ± 12% | |
prostate | 3 studies | 38% ± 12% | |
brain | 3 studies | 30% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 3523.65 | 226 / 226 | 100% | 159.10 | 406 / 406 |
ovary | 100% | 2457.46 | 180 / 180 | 100% | 160.92 | 430 / 430 |
pancreas | 100% | 3090.51 | 328 / 328 | 100% | 173.43 | 178 / 178 |
uterus | 100% | 2961.18 | 170 / 170 | 100% | 190.15 | 459 / 459 |
esophagus | 100% | 3978.29 | 1444 / 1445 | 100% | 128.55 | 183 / 183 |
skin | 100% | 6395.43 | 1809 / 1809 | 100% | 195.99 | 471 / 472 |
thymus | 100% | 3577.65 | 653 / 653 | 100% | 184.79 | 603 / 605 |
kidney | 100% | 3859.04 | 89 / 89 | 100% | 158.78 | 897 / 901 |
intestine | 100% | 3285.55 | 966 / 966 | 99% | 228.23 | 523 / 527 |
prostate | 100% | 4115.11 | 245 / 245 | 99% | 295.56 | 498 / 502 |
stomach | 100% | 3336.69 | 359 / 359 | 99% | 181.40 | 283 / 286 |
bladder | 100% | 3415.48 | 21 / 21 | 99% | 234.65 | 498 / 504 |
adrenal gland | 100% | 5163.43 | 258 / 258 | 99% | 137.50 | 227 / 230 |
breast | 100% | 3896.10 | 459 / 459 | 98% | 163.71 | 1100 / 1118 |
lung | 100% | 3201.06 | 576 / 578 | 99% | 176.08 | 1140 / 1155 |
brain | 91% | 1094.90 | 2399 / 2642 | 99% | 83.10 | 699 / 705 |
adipose | 100% | 3736.80 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 255.95 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 353.01 | 29 / 29 |
spleen | 100% | 4421.59 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 189.45 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 442.54 | 1 / 1 |
blood vessel | 99% | 2334.34 | 1326 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 3722.05 | 908 / 929 | 0% | 0 | 0 / 0 |
heart | 95% | 1549.62 | 816 / 861 | 0% | 0 | 0 / 0 |
muscle | 92% | 1262.71 | 735 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007625 | Biological process | grooming behavior |
GO_0044209 | Biological process | AMP salvage |
GO_0032264 | Biological process | IMP salvage |
GO_0006168 | Biological process | adenine salvage |
GO_0006166 | Biological process | purine ribonucleoside salvage |
GO_0032263 | Biological process | GMP salvage |
GO_0034774 | Cellular component | secretory granule lumen |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005576 | Cellular component | extracellular region |
GO_0005737 | Cellular component | cytoplasm |
GO_0016208 | Molecular function | AMP binding |
GO_0003999 | Molecular function | adenine phosphoribosyltransferase activity |
GO_0005515 | Molecular function | protein binding |
GO_0002055 | Molecular function | adenine binding |
Gene name | APRT |
Protein name | Adenine phosphoribosyltransferase (APRT) (EC 2.4.2.7) Adenine phosphoribosyltransferase adenine phosphoribosyltransferase (EC 2.4.2.7) |
Synonyms | |
Description | FUNCTION: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. . |
Accessions | ENST00000426324.6 [P07741-2] ENST00000569616.1 H3BQZ9 ENST00000563655.5 ENST00000378364.8 [P07741-1] H3BQF1 ENST00000568319.5 ENST00000567391.5 P07741 Q12898 H3BQB1 H3BSW3 ENST00000567713.5 |