Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 19 studies | 50% ± 13% | |
lung | 17 studies | 39% ± 15% | |
intestine | 12 studies | 37% ± 18% | |
lymph node | 7 studies | 50% ± 15% | |
brain | 7 studies | 22% ± 4% | |
kidney | 6 studies | 38% ± 13% | |
bone marrow | 6 studies | 43% ± 24% | |
liver | 6 studies | 43% ± 24% | |
eye | 5 studies | 24% ± 6% | |
pancreas | 4 studies | 42% ± 16% | |
placenta | 4 studies | 46% ± 19% | |
uterus | 4 studies | 46% ± 14% | |
breast | 4 studies | 32% ± 4% | |
prostate | 3 studies | 26% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 7996.61 | 1445 / 1445 | 100% | 309.53 | 183 / 183 |
ovary | 100% | 10768.74 | 180 / 180 | 100% | 244.56 | 430 / 430 |
stomach | 100% | 7032.32 | 359 / 359 | 100% | 315.49 | 286 / 286 |
uterus | 100% | 9089.32 | 170 / 170 | 100% | 453.96 | 459 / 459 |
intestine | 100% | 9391.93 | 966 / 966 | 100% | 385.77 | 526 / 527 |
prostate | 100% | 7023.84 | 245 / 245 | 100% | 252.80 | 501 / 502 |
thymus | 100% | 7105.92 | 653 / 653 | 100% | 358.92 | 603 / 605 |
lung | 100% | 8581.08 | 578 / 578 | 100% | 296.54 | 1151 / 1155 |
brain | 100% | 5636.58 | 2635 / 2642 | 100% | 237.06 | 704 / 705 |
bladder | 100% | 9147.48 | 21 / 21 | 99% | 333.85 | 501 / 504 |
skin | 100% | 11842.94 | 1809 / 1809 | 99% | 299.95 | 469 / 472 |
pancreas | 99% | 5878.01 | 325 / 328 | 100% | 263.55 | 178 / 178 |
breast | 100% | 9662.72 | 459 / 459 | 99% | 307.74 | 1106 / 1118 |
kidney | 100% | 5349.18 | 89 / 89 | 98% | 182.39 | 886 / 901 |
adrenal gland | 100% | 5066.56 | 258 / 258 | 95% | 178.19 | 219 / 230 |
liver | 91% | 2629.81 | 206 / 226 | 98% | 159.51 | 396 / 406 |
adipose | 100% | 9635.85 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 9616.20 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 704.64 | 29 / 29 |
spleen | 100% | 8304.44 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 443.42 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 285.77 | 1 / 1 |
peripheral blood | 99% | 9013.48 | 918 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 250.70 | 79 / 80 |
muscle | 98% | 4321.36 | 783 / 803 | 0% | 0 | 0 / 0 |
heart | 95% | 3809.68 | 820 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0045596 | Biological process | negative regulation of cell differentiation |
GO_0001944 | Biological process | vasculature development |
GO_0006919 | Biological process | activation of cysteine-type endopeptidase activity involved in apoptotic process |
GO_0021591 | Biological process | ventricular system development |
GO_0046827 | Biological process | positive regulation of protein export from nucleus |
GO_0042981 | Biological process | regulation of apoptotic process |
GO_0060021 | Biological process | roof of mouth development |
GO_0048839 | Biological process | inner ear development |
GO_0006334 | Biological process | nucleosome assembly |
GO_0005730 | Cellular component | nucleolus |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0070063 | Molecular function | RNA polymerase binding |
GO_0005515 | Molecular function | protein binding |
GO_0042393 | Molecular function | histone binding |
Gene name | ANP32B |
Protein name | Acidic leucine-rich nuclear phosphoprotein 32 family member B (Acidic protein rich in leucines) (Putative HLA-DR-associated protein I-2) (PHAPI2) (Silver-stainable protein SSP29) |
Synonyms | APRIL PHAPI2 |
Description | FUNCTION: Multifunctional protein that is involved in the regulation of many processes including cell proliferation, apoptosis, cell cycle progression or transcription . Regulates the proliferation of neuronal stem cells, differentiation of leukemic cells and progression from G1 to S phase of the cell cycle. As negative regulator of caspase-3-dependent apoptosis, may act as an antagonist of ANP32A in regulating tissue homeostasis . Exhibits histone chaperone properties, able to recruit histones to certain promoters, thus regulating the transcription of specific genes . Also plays an essential role in the nucleocytoplasmic transport of specific mRNAs via the uncommon nuclear mRNA export receptor XPO1/CRM1 . Participates in the regulation of adequate adaptive immune responses by acting on mRNA expression and cell proliferation (By similarity). .; FUNCTION: (Microbial infection) Plays an essential role in influenza A and B viral genome replication . Also plays a role in foamy virus mRNA export from the nucleus to the cytoplasm . . |
Accessions | Q92688 ENST00000339399.5 [Q92688-1] |