TRAPPC1 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
natural killer cell	37 studies	44% ± 14%	Explore
B cell	33 studies	39% ± 14%	Explore
CD8-positive, alpha-beta T cell	33 studies	43% ± 19%	Explore
CD4-positive, alpha-beta T cell	29 studies	39% ± 17%	Explore
T cell	27 studies	38% ± 14%	Explore
macrophage	26 studies	36% ± 12%	Explore
conventional dendritic cell	26 studies	50% ± 14%	Explore
classical monocyte	25 studies	43% ± 15%	Explore
regulatory T cell	25 studies	45% ± 18%	Explore
non-classical monocyte	23 studies	47% ± 15%	Explore
endothelial cell	22 studies	34% ± 14%	Explore
plasmacytoid dendritic cell	20 studies	51% ± 15%	Explore
fibroblast	20 studies	31% ± 15%	Explore
mature NK T cell	19 studies	41% ± 12%	Explore
memory B cell	19 studies	37% ± 10%	Explore
naive B cell	19 studies	30% ± 9%	Explore
pericyte	19 studies	30% ± 11%	Explore
monocyte	17 studies	41% ± 11%	Explore
dendritic cell	16 studies	50% ± 21%	Explore
smooth muscle cell	16 studies	33% ± 13%	Explore
gamma-delta T cell	16 studies	42% ± 15%	Explore
mast cell	15 studies	30% ± 14%	Explore
endothelial cell of lymphatic vessel	15 studies	41% ± 17%	Explore
CD16-positive, CD56-dim natural killer cell, human	15 studies	47% ± 12%	Explore
CD16-negative, CD56-bright natural killer cell, human	14 studies	41% ± 14%	Explore
epithelial cell	14 studies	43% ± 19%	Explore
plasma cell	13 studies	42% ± 13%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	13 studies	32% ± 10%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	13 studies	40% ± 17%	Explore
CD8-positive, alpha-beta memory T cell	12 studies	40% ± 21%	Explore
basal cell	12 studies	34% ± 19%	Explore
myeloid cell	12 studies	42% ± 15%	Explore
CD4-positive, alpha-beta memory T cell	11 studies	41% ± 23%	Explore
ciliated cell	11 studies	37% ± 16%	Explore
capillary endothelial cell	11 studies	24% ± 7%	Explore
myofibroblast cell	11 studies	30% ± 11%	Explore
connective tissue cell	11 studies	37% ± 9%	Explore
mucosal invariant T cell	11 studies	34% ± 10%	Explore
plasmablast	10 studies	47% ± 21%	Explore
platelet	10 studies	45% ± 14%	Explore
effector memory CD8-positive, alpha-beta T cell	9 studies	39% ± 14%	Explore
endothelial cell of artery	9 studies	28% ± 9%	Explore
vein endothelial cell	9 studies	28% ± 7%	Explore
type I pneumocyte	8 studies	41% ± 15%	Explore
innate lymphoid cell	8 studies	31% ± 11%	Explore
abnormal cell	8 studies	34% ± 17%	Explore
T follicular helper cell	8 studies	41% ± 11%	Explore
club cell	7 studies	30% ± 13%	Explore
progenitor cell	7 studies	38% ± 16%	Explore
goblet cell	7 studies	26% ± 14%	Explore
hematopoietic precursor cell	6 studies	43% ± 21%	Explore
secretory cell	6 studies	33% ± 14%	Explore
effector CD8-positive, alpha-beta T cell	6 studies	59% ± 22%	Explore
epithelial cell of proximal tubule	6 studies	31% ± 9%	Explore
hematopoietic stem cell	6 studies	40% ± 17%	Explore
precursor B cell	6 studies	38% ± 13%	Explore
endothelial cell of vascular tree	6 studies	25% ± 8%	Explore
alveolar macrophage	5 studies	26% ± 8%	Explore
CD4-positive helper T cell	5 studies	22% ± 6%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	5 studies	38% ± 13%	Explore
exhausted T cell	5 studies	62% ± 14%	Explore
leukocyte	5 studies	34% ± 15%	Explore
mononuclear phagocyte	5 studies	41% ± 20%	Explore
kidney loop of Henle epithelial cell	5 studies	28% ± 5%	Explore
renal alpha-intercalated cell	5 studies	35% ± 6%	Explore
enterocyte	5 studies	22% ± 4%	Explore
enteroendocrine cell	5 studies	36% ± 17%	Explore
mesothelial cell	5 studies	46% ± 19%	Explore
pro-B cell	5 studies	36% ± 7%	Explore
type II pneumocyte	5 studies	50% ± 17%	Explore
neutrophil	5 studies	23% ± 4%	Explore
intermediate monocyte	5 studies	58% ± 14%	Explore
effector memory CD4-positive, alpha-beta T cell	5 studies	51% ± 24%	Explore
central memory CD8-positive, alpha-beta T cell	4 studies	31% ± 16%	Explore
pancreatic A cell	4 studies	46% ± 21%	Explore
kidney distal convoluted tubule epithelial cell	4 studies	38% ± 5%	Explore
transit amplifying cell	4 studies	19% ± 3%	Explore
retinal ganglion cell	4 studies	78% ± 24%	Explore
erythroblast	4 studies	35% ± 20%	Explore
megakaryocyte	4 studies	42% ± 16%	Explore
immature B cell	4 studies	52% ± 15%	Explore
neuron	4 studies	61% ± 16%	Explore
double negative thymocyte	4 studies	61% ± 15%	Explore
germinal center B cell	4 studies	48% ± 18%	Explore
effector CD4-positive, alpha-beta T cell	4 studies	76% ± 12%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	25% ± 6%	Explore
erythrocyte	4 studies	32% ± 17%	Explore
group 3 innate lymphoid cell	4 studies	44% ± 13%	Explore
T-helper 17 cell	4 studies	49% ± 23%	Explore
CD4-positive, alpha-beta cytotoxic T cell	3 studies	55% ± 29%	Explore
ionocyte	3 studies	26% ± 1%	Explore
type B pancreatic cell	3 studies	47% ± 13%	Explore
glomerular endothelial cell	3 studies	21% ± 1%	Explore
intestinal crypt stem cell	3 studies	24% ± 9%	Explore
extravillous trophoblast	3 studies	58% ± 21%	Explore
placental villous trophoblast	3 studies	55% ± 28%	Explore
lymphocyte	3 studies	46% ± 19%	Explore
neuroendocrine cell	3 studies	39% ± 16%	Explore
amacrine cell	3 studies	31% ± 16%	Explore
retina horizontal cell	3 studies	39% ± 16%	Explore
microglial cell	3 studies	28% ± 9%	Explore
intraepithelial lymphocyte	3 studies	54% ± 7%	Explore
inflammatory macrophage	3 studies	26% ± 7%	Explore
pancreatic ductal cell	3 studies	49% ± 5%	Explore
granulocyte	3 studies	34% ± 12%	Explore
glial cell	3 studies	32% ± 19%	Explore
T-helper 1 cell	3 studies	55% ± 22%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	38% ± 14%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
peripheral blood	19 studies	40% ± 14%	Explore
lung	17 studies	32% ± 14%	Explore
intestine	10 studies	27% ± 13%	Explore
kidney	7 studies	35% ± 8%	Explore
eye	5 studies	25% ± 10%	Explore
bone marrow	5 studies	28% ± 10%	Explore
liver	5 studies	36% ± 20%	Explore
brain	5 studies	25% ± 6%	Explore
pancreas	4 studies	42% ± 19%	Explore
lymph node	4 studies	40% ± 11%	Explore
placenta	3 studies	52% ± 26%	Explore
uterus	3 studies	44% ± 16%	Explore
breast	3 studies	23% ± 6%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
adrenal gland	100%	3652.71	258 / 258	100%	153.58	230 / 230
esophagus	100%	3213.78	1445 / 1445	100%	122.97	183 / 183
ovary	100%	2078.99	180 / 180	100%	182.31	430 / 430
skin	100%	3508.41	1809 / 1809	100%	207.14	472 / 472
thymus	100%	2879.75	653 / 653	100%	178.25	605 / 605
uterus	100%	2902.95	170 / 170	100%	153.55	459 / 459
brain	100%	3063.87	2641 / 2642	100%	135.79	705 / 705
intestine	100%	2980.79	966 / 966	99%	130.14	524 / 527
kidney	100%	3788.71	89 / 89	99%	158.91	894 / 901
prostate	100%	2643.38	245 / 245	99%	131.04	498 / 502
pancreas	99%	1522.65	325 / 328	100%	125.04	178 / 178
lung	100%	3515.28	578 / 578	99%	131.92	1139 / 1155
stomach	100%	2407.30	359 / 359	99%	132.52	282 / 286
breast	100%	2674.90	459 / 459	98%	136.43	1101 / 1118
bladder	100%	2813.38	21 / 21	98%	158.62	495 / 504
liver	100%	1730.01	225 / 226	99%	87.42	400 / 406
adipose	100%	2653.43	1204 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	100%	213.89	80 / 80
lymph node	0%	0	0 / 0	100%	283.75	29 / 29
spleen	100%	4196.27	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	140.98	45 / 45
ureter	0%	0	0 / 0	100%	76.60	1 / 1
peripheral blood	100%	6705.98	927 / 929	0%	0	0 / 0
blood vessel	100%	3032.82	1329 / 1335	0%	0	0 / 0
muscle	99%	2057.52	798 / 803	0%	0	0 / 0
heart	99%	2656.72	853 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0006888	Biological process	endoplasmic reticulum to Golgi vesicle-mediated transport
GO_0006901	Biological process	vesicle coating
GO_0048208	Biological process	COPII vesicle coating
GO_0099022	Biological process	vesicle tethering
GO_0035578	Cellular component	azurophil granule lumen
GO_1990071	Cellular component	TRAPPII protein complex
GO_0030008	Cellular component	TRAPP complex
GO_0005783	Cellular component	endoplasmic reticulum
GO_0005829	Cellular component	cytosol
GO_0005576	Cellular component	extracellular region
GO_1990072	Cellular component	TRAPPIII protein complex
GO_0005737	Cellular component	cytoplasm
GO_0005515	Molecular function	protein binding

Gene name	TRAPPC1
Protein name	Trafficking protein particle complex subunit Trafficking protein particle complex subunit 1 Trafficking protein particle complex subunit 1 (BET5 homolog) (Multiple myeloma protein 2) (MUM-2)
Synonyms	BET5 MUM2
Description	FUNCTION: May play a role in vesicular transport from endoplasmic reticulum to Golgi.
Accessions	ENST00000571739.5 ENST00000575639.1 ENST00000572656.2 I3L3S0 Q9Y5R8 ENST00000540486.5 ENST00000303731.9 I3L1R8 ENST00000571947.5 I3L3V5

TRAPPC1 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review