Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 17 studies | 42% ± 12% | |
lung | 16 studies | 37% ± 13% | |
intestine | 10 studies | 34% ± 16% | |
kidney | 8 studies | 33% ± 10% | |
brain | 7 studies | 22% ± 4% | |
eye | 6 studies | 35% ± 12% | |
bone marrow | 6 studies | 26% ± 8% | |
lymph node | 6 studies | 34% ± 9% | |
placenta | 5 studies | 31% ± 6% | |
uterus | 5 studies | 46% ± 17% | |
liver | 5 studies | 35% ± 22% | |
pancreas | 4 studies | 44% ± 4% | |
breast | 4 studies | 44% ± 8% | |
thymus | 3 studies | 56% ± 25% | |
prostate | 3 studies | 48% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 5079.51 | 459 / 459 | 100% | 49.69 | 1118 / 1118 |
esophagus | 100% | 3873.06 | 1445 / 1445 | 100% | 34.42 | 183 / 183 |
ovary | 100% | 6904.69 | 180 / 180 | 100% | 36.43 | 430 / 430 |
prostate | 100% | 3845.02 | 245 / 245 | 100% | 48.62 | 502 / 502 |
thymus | 100% | 3496.73 | 653 / 653 | 100% | 49.62 | 604 / 605 |
lung | 100% | 3740.10 | 577 / 578 | 100% | 44.17 | 1155 / 1155 |
bladder | 100% | 4867.95 | 21 / 21 | 100% | 42.33 | 503 / 504 |
uterus | 100% | 5504.48 | 170 / 170 | 100% | 43.28 | 458 / 459 |
pancreas | 100% | 3377.67 | 327 / 328 | 100% | 36.17 | 178 / 178 |
adrenal gland | 100% | 3068.21 | 258 / 258 | 100% | 39.06 | 229 / 230 |
kidney | 100% | 3088.73 | 89 / 89 | 100% | 41.53 | 897 / 901 |
brain | 100% | 3308.88 | 2629 / 2642 | 100% | 51.74 | 705 / 705 |
intestine | 100% | 4486.12 | 966 / 966 | 99% | 46.65 | 522 / 527 |
stomach | 100% | 3874.02 | 359 / 359 | 99% | 39.28 | 283 / 286 |
liver | 99% | 1630.84 | 223 / 226 | 100% | 24.16 | 405 / 406 |
skin | 100% | 4066.05 | 1805 / 1809 | 96% | 41.14 | 453 / 472 |
blood vessel | 100% | 6117.26 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 51.42 | 29 / 29 |
muscle | 100% | 3745.83 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 3112.49 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 35.81 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 20.44 | 1 / 1 |
adipose | 100% | 4760.22 | 1203 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 98% | 37.67 | 78 / 80 |
heart | 97% | 2423.63 | 832 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 53% | 2542.06 | 494 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006412 | Biological process | translation |
GO_0042273 | Biological process | ribosomal large subunit biogenesis |
GO_0005730 | Cellular component | nucleolus |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005840 | Cellular component | ribosome |
GO_0003735 | Molecular function | structural constituent of ribosome |
GO_0005515 | Molecular function | protein binding |
Gene name | RSL24D1 |
Protein name | Probable ribosome biogenesis protein RLP24 (Ribosomal L24 domain-containing protein 1) (Ribosomal protein L24-like) Probable ribosome biogenesis protein RLP24 (Ribosomal L24 domain-containing protein 1) Ribosomal L24 domain containing 1 |
Synonyms | My024 C15orf15 RPL24L |
Description | FUNCTION: Involved in the biogenesis of the 60S ribosomal subunit. Ensures the docking of GTPBP4/NOG1 to pre-60S particles (By similarity). . FUNCTION: Involved in the biogenesis of the 60S ribosomal subunit. Ensures the docking of GTPBP4/NOG1 to pre-60S particles. . FUNCTION: Involved in the biogenesis of the 60S ribosomal subunit. Ensures the docking of GTPBP4/NOG1 to pre-60S particles. . FUNCTION: Involved in the biogenesis of the 60S ribosomal subunit. Ensures the docking of GTPBP4/NOG1 to pre-60S particles. . FUNCTION: Involved in the biogenesis of the 60S ribosomal subunit. Ensures the docking of GTPBP4/NOG1 to pre-60S particles. . |
Accessions | ENST00000562993.5 H3BPF2 ENST00000677172.1 ENST00000677730.1 H3BMQ2 ENST00000677989.1 ENST00000260443.9 ENST00000562895.2 A0A7I2V3F2 ENST00000677147.1 A0A7I2V2C6 Q9UHA3 ENST00000569386.2 A0A7I2V359 |