Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 17 studies | 29% ± 10% | |
lung | 16 studies | 38% ± 16% | |
intestine | 10 studies | 32% ± 17% | |
kidney | 8 studies | 33% ± 11% | |
brain | 8 studies | 24% ± 5% | |
liver | 7 studies | 32% ± 24% | |
eye | 6 studies | 27% ± 12% | |
pancreas | 5 studies | 31% ± 14% | |
bone marrow | 5 studies | 27% ± 5% | |
lymph node | 5 studies | 22% ± 6% | |
placenta | 4 studies | 43% ± 23% | |
uterus | 4 studies | 40% ± 20% | |
breast | 4 studies | 23% ± 1% | |
adrenal gland | 3 studies | 20% ± 0% | |
prostate | 3 studies | 33% ± 7% | |
skin | 3 studies | 24% ± 6% | |
thymus | 3 studies | 58% ± 30% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 4548.30 | 1445 / 1445 | 100% | 56.92 | 183 / 183 |
liver | 100% | 3856.64 | 226 / 226 | 100% | 42.74 | 406 / 406 |
lung | 100% | 4639.13 | 578 / 578 | 100% | 62.99 | 1155 / 1155 |
ovary | 100% | 3148.79 | 180 / 180 | 100% | 44.81 | 430 / 430 |
prostate | 100% | 4917.33 | 245 / 245 | 100% | 67.75 | 502 / 502 |
stomach | 100% | 3509.28 | 359 / 359 | 100% | 52.94 | 286 / 286 |
uterus | 100% | 4249.05 | 170 / 170 | 100% | 89.89 | 459 / 459 |
thymus | 100% | 3846.67 | 653 / 653 | 100% | 49.56 | 604 / 605 |
breast | 100% | 4504.85 | 459 / 459 | 100% | 65.77 | 1116 / 1118 |
kidney | 100% | 3998.44 | 89 / 89 | 100% | 36.83 | 898 / 901 |
bladder | 100% | 4229.19 | 21 / 21 | 100% | 69.21 | 502 / 504 |
intestine | 100% | 5051.54 | 966 / 966 | 99% | 59.20 | 523 / 527 |
brain | 99% | 2712.19 | 2620 / 2642 | 100% | 38.71 | 705 / 705 |
adrenal gland | 100% | 4993.60 | 258 / 258 | 99% | 38.07 | 228 / 230 |
pancreas | 98% | 1889.32 | 323 / 328 | 99% | 50.24 | 177 / 178 |
skin | 100% | 4654.44 | 1809 / 1809 | 98% | 50.61 | 462 / 472 |
lymph node | 0% | 0 | 0 / 0 | 100% | 100.32 | 29 / 29 |
muscle | 100% | 5693.87 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 5589.23 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 75.78 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 44.38 | 1 / 1 |
adipose | 100% | 4576.49 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3749.21 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 3096.40 | 852 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 83% | 3554.29 | 771 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 79% | 22.63 | 63 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0043161 | Biological process | proteasome-mediated ubiquitin-dependent protein catabolic process |
GO_0000932 | Cellular component | P-body |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0000502 | Cellular component | proteasome complex |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005839 | Cellular component | proteasome core complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0019773 | Cellular component | proteasome core complex, alpha-subunit complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
Gene name | PSMA4 |
Protein name | Proteasome subunit beta Proteasome 20S subunit alpha 4 Proteasome subunit alpha type-4 (Macropain subunit C9) (Multicatalytic endopeptidase complex subunit C9) (Proteasome component C9) (Proteasome subunit L) Proteasome subunit alpha type |
Synonyms | HC9 PSC9 |
Description | FUNCTION: Component of the 20S core proteasome complex involved in the proteolytic degradation of most intracellular proteins. This complex plays numerous essential roles within the cell by associating with different regulatory particles. Associated with two 19S regulatory particles, forms the 26S proteasome and thus participates in the ATP-dependent degradation of ubiquitinated proteins. The 26S proteasome plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins that could impair cellular functions, and by removing proteins whose functions are no longer required. Associated with the PA200 or PA28, the 20S proteasome mediates ubiquitin-independent protein degradation. This type of proteolysis is required in several pathways including spermatogenesis (20S-PA200 complex) or generation of a subset of MHC class I-presented antigenic peptides (20S-PA28 complex). . FUNCTION: Component of the 20S core proteasome complex involved in the proteolytic degradation of most intracellular proteins. This complex plays numerous essential roles within the cell by associating with different regulatory particles. Associated with two 19S regulatory particles, forms the 26S proteasome and thus participates in the ATP-dependent degradation of ubiquitinated proteins. The 26S proteasome plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins that could impair cellular functions, and by removing proteins whose functions are no longer required. Associated with the PA200 or PA28, the 20S proteasome mediates ubiquitin-independent protein degradation. This type of proteolysis is required in several pathways including spermatogenesis (20S-PA200 complex) or generation of a subset of MHC class I-presented antigenic peptides (20S-PA28 complex). .; FUNCTION: Component of the proteasome, a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity. . FUNCTION: Component of the 20S core proteasome complex involved in the proteolytic degradation of most intracellular proteins. This complex plays numerous essential roles within the cell by associating with different regulatory particles. Associated with two 19S regulatory particles, forms the 26S proteasome and thus participates in the ATP-dependent degradation of ubiquitinated proteins. The 26S proteasome plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins that could impair cellular functions, and by removing proteins whose functions are no longer required. Associated with the PA200 or PA28, the 20S proteasome mediates ubiquitin-independent protein degradation. This type of proteolysis is required in several pathways including spermatogenesis (20S-PA200 complex) or generation of a subset of MHC class I-presented antigenic peptides (20S-PA28 complex). . FUNCTION: Component of the 20S core proteasome complex involved in the proteolytic degradation of most intracellular proteins. This complex plays numerous essential roles within the cell by associating with different regulatory particles. Associated with two 19S regulatory particles, forms the 26S proteasome and thus participates in the ATP-dependent degradation of ubiquitinated proteins. The 26S proteasome plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins that could impair cellular functions, and by removing proteins whose functions are no longer required. Associated with the PA200 or PA28, the 20S proteasome mediates ubiquitin-independent protein degradation. This type of proteolysis is required in several pathways including spermatogenesis (20S-PA200 complex) or generation of a subset of MHC class I-presented antigenic peptides (20S-PA28 complex). . FUNCTION: Component of the 20S core proteasome complex involved in the proteolytic degradation of most intracellular proteins. This complex plays numerous essential roles within the cell by associating with different regulatory particles. Associated with two 19S regulatory particles, forms the 26S proteasome and thus participates in the ATP-dependent degradation of ubiquitinated proteins. The 26S proteasome plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins that could impair cellular functions, and by removing proteins whose functions are no longer required. Associated with the PA200 or PA28, the 20S proteasome mediates ubiquitin-independent protein degradation. This type of proteolysis is required in several pathways including spermatogenesis (20S-PA200 complex) or generation of a subset of MHC class I-presented antigenic peptides (20S-PA28 complex). . FUNCTION: Component of the 20S core proteasome complex involved in the proteolytic degradation of most intracellular proteins. This complex plays numerous essential roles within the cell by associating with different regulatory particles. Associated with two 19S regulatory particles, forms the 26S proteasome and thus participates in the ATP-dependent degradation of ubiquitinated proteins. The 26S proteasome plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins that could impair cellular functions, and by removing proteins whose functions are no longer required. Associated with the PA200 or PA28, the 20S proteasome mediates ubiquitin-independent protein degradation. This type of proteolysis is required in several pathways including spermatogenesis (20S-PA200 complex) or generation of a subset of MHC class I-presented antigenic peptides (20S-PA28 complex). . |
Accessions | ENST00000044462.12 [P25789-1] ENST00000558281.5 ENST00000558341.5 ENST00000558094.1 P25789 ENST00000559437.5 H0YLS6 H0YMV3 ENST00000559948.5 ENST00000559082.5 [P25789-1] H0YMI6 H0YLC2 H0YN18 H0YMA1 ENST00000559146.5 ENST00000560737.5 H0YL69 H0YKS0 H0YKT8 ENST00000559365.5 H0YMZ1 ENST00000413382.6 [P25789-2] ENST00000560217.5 ENST00000559154.5 |