Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 19 studies | 38% ± 14% | |
lung | 17 studies | 32% ± 13% | |
brain | 13 studies | 31% ± 15% | |
eye | 10 studies | 35% ± 17% | |
intestine | 9 studies | 28% ± 13% | |
kidney | 9 studies | 30% ± 8% | |
placenta | 5 studies | 26% ± 9% | |
lymph node | 5 studies | 38% ± 4% | |
liver | 5 studies | 37% ± 19% | |
pancreas | 4 studies | 48% ± 16% | |
bone marrow | 4 studies | 31% ± 9% | |
uterus | 4 studies | 38% ± 13% | |
prostate | 4 studies | 25% ± 7% | |
breast | 4 studies | 28% ± 4% | |
adrenal gland | 3 studies | 33% ± 8% | |
skin | 3 studies | 26% ± 3% | |
thymus | 3 studies | 56% ± 25% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 2763.53 | 459 / 459 | 100% | 51.63 | 1118 / 1118 |
esophagus | 100% | 2375.41 | 1444 / 1445 | 100% | 25.53 | 183 / 183 |
brain | 100% | 3661.16 | 2638 / 2642 | 100% | 61.29 | 705 / 705 |
ovary | 100% | 2962.10 | 180 / 180 | 100% | 41.65 | 429 / 430 |
stomach | 100% | 1779.16 | 359 / 359 | 100% | 30.01 | 285 / 286 |
lung | 100% | 2196.73 | 576 / 578 | 100% | 33.94 | 1153 / 1155 |
bladder | 100% | 2269.14 | 21 / 21 | 99% | 32.25 | 501 / 504 |
prostate | 100% | 2087.82 | 244 / 245 | 100% | 49.43 | 501 / 502 |
intestine | 100% | 2329.63 | 966 / 966 | 99% | 31.15 | 523 / 527 |
thymus | 100% | 2181.15 | 652 / 653 | 99% | 39.64 | 601 / 605 |
uterus | 100% | 2529.39 | 170 / 170 | 99% | 35.76 | 455 / 459 |
kidney | 100% | 2276.47 | 89 / 89 | 99% | 41.82 | 891 / 901 |
skin | 100% | 1909.11 | 1805 / 1809 | 98% | 39.27 | 464 / 472 |
adrenal gland | 100% | 4038.10 | 258 / 258 | 98% | 62.15 | 225 / 230 |
liver | 96% | 1111.12 | 218 / 226 | 100% | 28.05 | 404 / 406 |
pancreas | 96% | 984.49 | 314 / 328 | 99% | 28.35 | 176 / 178 |
adipose | 100% | 2905.50 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2837.41 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 47.76 | 29 / 29 |
muscle | 100% | 3278.61 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2181.19 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 35.71 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 10.17 | 1 / 1 |
peripheral blood | 98% | 2374.74 | 911 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 95% | 36.65 | 76 / 80 |
heart | 94% | 2521.30 | 811 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007613 | Biological process | memory |
GO_0006412 | Biological process | translation |
GO_0007283 | Biological process | spermatogenesis |
GO_1900271 | Biological process | regulation of long-term synaptic potentiation |
GO_0045947 | Biological process | negative regulation of translational initiation |
GO_0017148 | Biological process | negative regulation of translation |
GO_0005737 | Cellular component | cytoplasm |
GO_0030371 | Molecular function | translation repressor activity |
GO_0000900 | Molecular function | mRNA regulatory element binding translation repressor activity |
GO_0005515 | Molecular function | protein binding |
GO_0003729 | Molecular function | mRNA binding |
Gene name | PAIP2 |
Protein name | Poly(A) binding protein interacting protein 2 Polyadenylate-binding protein-interacting protein 2 (PABP-interacting protein 2) (PAIP-2) (Poly(A)-binding protein-interacting protein 2) Polyadenylate-binding protein-interacting protein 2 |
Synonyms | PAIP2A HSPC218 |
Description | FUNCTION: Acts as a repressor in the regulation of translation initiation of poly(A)-containing mRNAs. Its inhibitory activity on translation is mediated via its action on PABPC1. Displaces the interaction of PABPC1 with poly(A) RNA and competes with PAIP1 for binding to PABPC1. Its association with PABPC1 results in disruption of the cytoplasmic poly(A) RNP structure organization. . FUNCTION: Acts as a repressor in the regulation of translation initiation of poly(A)-containing mRNAs. Its inhibitory activity on translation is mediated via its action on PABPC1. Displaces the interaction of PABPC1 with poly(A) RNA and competes with PAIP1 for binding to PABPC1. Its association with PABPC1 results in disruption of the cytoplasmic poly(A) RNP structure organization. . FUNCTION: Acts as a repressor in the regulation of translation initiation of poly(A)-containing mRNAs. Its inhibitory activity on translation is mediated via its action on PABPC1. Displaces the interaction of PABPC1 with poly(A) RNA and competes with PAIP1 for binding to PABPC1. Its association with PABPC1 results in disruption of the cytoplasmic poly(A) RNP structure organization. . FUNCTION: Acts as a repressor in the regulation of translation initiation of poly(A)-containing mRNAs. Its inhibitory activity on translation is mediated via its action on PABPC1. Displaces the interaction of PABPC1 with poly(A) RNA and competes with PAIP1 for binding to PABPC1. Its association with PABPC1 results in disruption of the cytoplasmic poly(A) RNP structure organization. . |
Accessions | ENST00000394795.6 Q49AE6 Q9BPZ3 D6RA77 Q6FID7 ENST00000507755.5 ENST00000265192.9 ENST00000511706.5 ENST00000510080.1 D6R9Y1 |