GOLGA4 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
endothelial cell	43 studies	36% ± 16%	Explore
fibroblast	40 studies	34% ± 16%	Explore
macrophage	30 studies	36% ± 17%	Explore
natural killer cell	29 studies	28% ± 9%	Explore
B cell	28 studies	25% ± 8%	Explore
pericyte	28 studies	29% ± 15%	Explore
smooth muscle cell	28 studies	29% ± 11%	Explore
CD4-positive, alpha-beta T cell	24 studies	22% ± 7%	Explore
CD8-positive, alpha-beta T cell	24 studies	24% ± 7%	Explore
T cell	21 studies	26% ± 9%	Explore
astrocyte	21 studies	42% ± 19%	Explore
mast cell	20 studies	26% ± 11%	Explore
epithelial cell	19 studies	42% ± 23%	Explore
basal cell	18 studies	39% ± 16%	Explore
ciliated cell	17 studies	34% ± 12%	Explore
memory B cell	17 studies	21% ± 5%	Explore
regulatory T cell	17 studies	24% ± 6%	Explore
endothelial cell of lymphatic vessel	16 studies	35% ± 14%	Explore
classical monocyte	16 studies	23% ± 10%	Explore
naive B cell	16 studies	23% ± 6%	Explore
oligodendrocyte	16 studies	45% ± 15%	Explore
oligodendrocyte precursor cell	16 studies	35% ± 17%	Explore
plasmacytoid dendritic cell	15 studies	28% ± 10%	Explore
CD16-positive, CD56-dim natural killer cell, human	15 studies	30% ± 9%	Explore
microglial cell	15 studies	47% ± 15%	Explore
gamma-delta T cell	15 studies	29% ± 10%	Explore
plasma cell	14 studies	34% ± 13%	Explore
mature NK T cell	14 studies	27% ± 9%	Explore
connective tissue cell	14 studies	27% ± 11%	Explore
mucosal invariant T cell	14 studies	26% ± 6%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	13 studies	25% ± 7%	Explore
CD16-negative, CD56-bright natural killer cell, human	13 studies	26% ± 7%	Explore
capillary endothelial cell	13 studies	23% ± 7%	Explore
endothelial cell of vascular tree	13 studies	26% ± 13%	Explore
type I pneumocyte	12 studies	37% ± 14%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	12 studies	24% ± 9%	Explore
myofibroblast cell	12 studies	29% ± 12%	Explore
monocyte	11 studies	31% ± 12%	Explore
type II pneumocyte	11 studies	48% ± 15%	Explore
CD8-positive, alpha-beta memory T cell	11 studies	29% ± 6%	Explore
club cell	11 studies	41% ± 15%	Explore
glutamatergic neuron	11 studies	51% ± 23%	Explore
effector memory CD8-positive, alpha-beta T cell	11 studies	30% ± 9%	Explore
myeloid cell	11 studies	38% ± 12%	Explore
dendritic cell	10 studies	35% ± 16%	Explore
secretory cell	10 studies	35% ± 10%	Explore
GABAergic neuron	10 studies	50% ± 23%	Explore
endothelial cell of artery	10 studies	26% ± 6%	Explore
adipocyte	10 studies	60% ± 14%	Explore
CD4-positive, alpha-beta memory T cell	9 studies	24% ± 6%	Explore
conventional dendritic cell	9 studies	26% ± 13%	Explore
vein endothelial cell	9 studies	34% ± 18%	Explore
plasmablast	8 studies	36% ± 16%	Explore
respiratory goblet cell	8 studies	49% ± 16%	Explore
non-classical monocyte	8 studies	25% ± 9%	Explore
abnormal cell	8 studies	31% ± 18%	Explore
neuron	8 studies	41% ± 22%	Explore
goblet cell	8 studies	39% ± 24%	Explore
amacrine cell	8 studies	42% ± 12%	Explore
retinal cone cell	8 studies	61% ± 13%	Explore
retinal rod cell	8 studies	55% ± 13%	Explore
interneuron	7 studies	52% ± 25%	Explore
retinal ganglion cell	7 studies	42% ± 15%	Explore
ionocyte	6 studies	41% ± 13%	Explore
leukocyte	6 studies	32% ± 5%	Explore
hepatocyte	6 studies	57% ± 30%	Explore
enterocyte	6 studies	29% ± 10%	Explore
retina horizontal cell	6 studies	50% ± 13%	Explore
mesothelial cell	6 studies	37% ± 13%	Explore
Mueller cell	6 studies	44% ± 14%	Explore
alveolar macrophage	5 studies	39% ± 20%	Explore
mononuclear phagocyte	5 studies	28% ± 13%	Explore
progenitor cell	5 studies	29% ± 3%	Explore
IgG plasma cell	5 studies	25% ± 6%	Explore
transit amplifying cell	5 studies	34% ± 25%	Explore
retinal bipolar neuron	5 studies	40% ± 6%	Explore
glial cell	5 studies	32% ± 7%	Explore
kidney loop of Henle epithelial cell	5 studies	31% ± 14%	Explore
brush cell	5 studies	32% ± 17%	Explore
retinal pigment epithelial cell	5 studies	63% ± 20%	Explore
adventitial cell	5 studies	29% ± 11%	Explore
mucus secreting cell	5 studies	46% ± 12%	Explore
cardiac muscle cell	5 studies	67% ± 11%	Explore
lymphocyte	5 studies	41% ± 13%	Explore
T follicular helper cell	5 studies	22% ± 4%	Explore
effector memory CD4-positive, alpha-beta T cell	5 studies	31% ± 10%	Explore
innate lymphoid cell	5 studies	23% ± 6%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	5 studies	25% ± 5%	Explore
deuterosomal cell	4 studies	29% ± 13%	Explore
duct epithelial cell	4 studies	48% ± 23%	Explore
squamous epithelial cell	4 studies	39% ± 22%	Explore
pancreatic A cell	4 studies	59% ± 21%	Explore
podocyte	4 studies	33% ± 10%	Explore
kidney distal convoluted tubule epithelial cell	4 studies	31% ± 15%	Explore
epithelial cell of proximal tubule	4 studies	47% ± 28%	Explore
granule cell	4 studies	36% ± 5%	Explore
precursor B cell	4 studies	20% ± 2%	Explore
OFF-bipolar cell	4 studies	34% ± 13%	Explore
ON-bipolar cell	4 studies	38% ± 13%	Explore
IgA plasma cell	4 studies	31% ± 14%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	45% ± 15%	Explore
luminal cell of prostate epithelium	4 studies	33% ± 13%	Explore
muscle cell	4 studies	51% ± 23%	Explore
enteroendocrine cell	4 studies	28% ± 9%	Explore
keratinocyte	4 studies	34% ± 7%	Explore
double negative thymocyte	4 studies	36% ± 11%	Explore
hillock cell	3 studies	31% ± 8%	Explore
pancreatic D cell	3 studies	52% ± 28%	Explore
type B pancreatic cell	3 studies	69% ± 19%	Explore
effector CD8-positive, alpha-beta T cell	3 studies	25% ± 5%	Explore
exhausted T cell	3 studies	31% ± 16%	Explore
glomerular endothelial cell	3 studies	19% ± 3%	Explore
intestinal crypt stem cell	3 studies	25% ± 4%	Explore
neural crest cell	3 studies	20% ± 2%	Explore
GABAergic interneuron	3 studies	46% ± 3%	Explore
placental villous trophoblast	3 studies	59% ± 29%	Explore
immature B cell	3 studies	23% ± 4%	Explore
serous secreting cell	3 studies	31% ± 8%	Explore
GABAergic amacrine cell	3 studies	41% ± 12%	Explore
glycinergic amacrine cell	3 studies	37% ± 5%	Explore
rod bipolar cell	3 studies	50% ± 8%	Explore
CD4-positive helper T cell	3 studies	27% ± 5%	Explore
cholangiocyte	3 studies	62% ± 6%	Explore
pancreatic ductal cell	3 studies	52% ± 25%	Explore
neural progenitor cell	3 studies	32% ± 8%	Explore
ependymal cell	3 studies	54% ± 14%	Explore
granulocyte	3 studies	24% ± 6%	Explore
chondrocyte	3 studies	45% ± 23%	Explore
group 3 innate lymphoid cell	3 studies	29% ± 9%	Explore
Schwann cell	3 studies	32% ± 13%	Explore
T-helper 17 cell	3 studies	21% ± 4%	Explore
erythrocyte	3 studies	41% ± 18%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	23% ± 4%	Explore
central memory CD8-positive, alpha-beta T cell	3 studies	24% ± 4%	Explore
myoepithelial cell	3 studies	34% ± 16%	Explore
progenitor cell of mammary luminal epithelium	3 studies	24% ± 8%	Explore
renal alpha-intercalated cell	3 studies	31% ± 12%	Explore
renal principal cell	3 studies	33% ± 12%	Explore
mural cell	3 studies	46% ± 16%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
lung	19 studies	31% ± 11%	Explore
brain	19 studies	45% ± 21%	Explore
peripheral blood	15 studies	24% ± 8%	Explore
eye	10 studies	49% ± 17%	Explore
kidney	7 studies	32% ± 16%	Explore
intestine	7 studies	25% ± 8%	Explore
liver	6 studies	39% ± 20%	Explore
heart	5 studies	42% ± 12%	Explore
breast	5 studies	29% ± 11%	Explore
pancreas	4 studies	54% ± 26%	Explore
bone marrow	4 studies	25% ± 10%	Explore
lymph node	4 studies	18% ± 2%	Explore
prostate	4 studies	26% ± 10%	Explore
adipose	4 studies	43% ± 17%	Explore
placenta	3 studies	51% ± 23%	Explore
uterus	3 studies	41% ± 12%	Explore
esophagus	3 studies	30% ± 14%	Explore
skin	3 studies	28% ± 9%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	100%	6647.03	459 / 459	100%	57.08	1114 / 1118
esophagus	100%	7091.72	1444 / 1445	99%	49.66	182 / 183
prostate	100%	7168.76	245 / 245	99%	58.83	498 / 502
pancreas	100%	6036.29	328 / 328	99%	33.17	176 / 178
lung	100%	6574.78	577 / 578	98%	30.91	1132 / 1155
thymus	100%	9214.04	653 / 653	97%	45.04	586 / 605
bladder	100%	6131.24	21 / 21	97%	30.58	487 / 504
stomach	100%	6965.76	359 / 359	97%	37.63	276 / 286
brain	99%	4204.63	2613 / 2642	97%	26.70	686 / 705
uterus	100%	5434.24	170 / 170	96%	28.23	439 / 459
intestine	100%	7316.83	966 / 966	95%	32.93	501 / 527
adrenal gland	100%	8316.30	258 / 258	93%	28.36	214 / 230
kidney	100%	6278.18	89 / 89	92%	22.73	832 / 901
ovary	100%	5520.83	180 / 180	92%	15.18	395 / 430
skin	100%	9929.51	1809 / 1809	91%	35.36	429 / 472
liver	100%	6436.54	226 / 226	91%	20.82	369 / 406
blood vessel	100%	6645.52	1335 / 1335	0%	0	0 / 0
muscle	100%	18358.64	803 / 803	0%	0	0 / 0
spleen	100%	5196.32	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	11.08	1 / 1
adipose	100%	7444.60	1203 / 1204	0%	0	0 / 0
heart	97%	8737.28	837 / 861	0%	0	0 / 0
tonsil	0%	0	0 / 0	96%	26.45	43 / 45
lymph node	0%	0	0 / 0	72%	14.82	21 / 29
eye	0%	0	0 / 0	56%	10.94	45 / 80
peripheral blood	30%	1459.36	275 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0