Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 21 studies | 55% ± 20% | |
peripheral blood | 20 studies | 57% ± 19% | |
intestine | 12 studies | 54% ± 23% | |
liver | 9 studies | 36% ± 19% | |
kidney | 9 studies | 46% ± 25% | |
eye | 7 studies | 39% ± 13% | |
uterus | 6 studies | 63% ± 26% | |
lymph node | 6 studies | 63% ± 27% | |
pancreas | 5 studies | 37% ± 14% | |
brain | 5 studies | 31% ± 15% | |
placenta | 5 studies | 37% ± 16% | |
heart | 5 studies | 27% ± 7% | |
prostate | 5 studies | 43% ± 6% | |
skin | 5 studies | 47% ± 24% | |
breast | 5 studies | 54% ± 18% | |
bone marrow | 4 studies | 45% ± 24% | |
adipose | 4 studies | 46% ± 23% | |
esophagus | 4 studies | 55% ± 20% | |
stomach | 4 studies | 26% ± 9% | |
ovary | 3 studies | 41% ± 18% | |
adrenal gland | 3 studies | 57% ± 25% | |
thymus | 3 studies | 47% ± 17% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 99% | 44077.29 | 242 / 245 | 98% | 892.73 | 491 / 502 |
thymus | 97% | 42427.31 | 636 / 653 | 90% | 844.06 | 545 / 605 |
lung | 99% | 68773.12 | 573 / 578 | 82% | 378.33 | 948 / 1155 |
esophagus | 90% | 33979.38 | 1303 / 1445 | 83% | 369.03 | 152 / 183 |
kidney | 87% | 22891.09 | 77 / 89 | 85% | 1112.50 | 765 / 901 |
breast | 100% | 56960.43 | 457 / 459 | 70% | 269.77 | 787 / 1118 |
bladder | 95% | 39363.57 | 20 / 21 | 71% | 264.77 | 359 / 504 |
ovary | 95% | 49221.37 | 171 / 180 | 68% | 295.97 | 293 / 430 |
liver | 81% | 32735.42 | 182 / 226 | 75% | 284.58 | 304 / 406 |
uterus | 80% | 30788.22 | 136 / 170 | 73% | 369.43 | 333 / 459 |
adrenal gland | 60% | 24099.67 | 156 / 258 | 90% | 548.64 | 207 / 230 |
intestine | 71% | 23889.53 | 684 / 966 | 64% | 203.42 | 339 / 527 |
stomach | 61% | 29438.62 | 218 / 359 | 65% | 230.73 | 187 / 286 |
pancreas | 31% | 5355.23 | 102 / 328 | 93% | 447.43 | 166 / 178 |
skin | 93% | 60072.59 | 1687 / 1809 | 28% | 70.56 | 134 / 472 |
adipose | 100% | 74876.50 | 1200 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 86285.57 | 1330 / 1335 | 0% | 0 | 0 / 0 |
spleen | 92% | 28527.57 | 222 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 82% | 498.85 | 37 / 45 |
peripheral blood | 78% | 51338.42 | 724 / 929 | 0% | 0 | 0 / 0 |
brain | 17% | 2678.60 | 438 / 2642 | 57% | 180.38 | 405 / 705 |
heart | 72% | 19286.82 | 619 / 861 | 0% | 0 | 0 / 0 |
muscle | 61% | 11240.01 | 490 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 24% | 56.30 | 7 / 29 |
eye | 0% | 0 | 0 / 0 | 1% | 1.73 | 1 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0051447 | Biological process | negative regulation of meiotic cell cycle |
GO_0008285 | Biological process | negative regulation of cell population proliferation |
GO_0007162 | Biological process | negative regulation of cell adhesion |
GO_0035970 | Biological process | peptidyl-threonine dephosphorylation |
GO_0035335 | Biological process | peptidyl-tyrosine dephosphorylation |
GO_0070262 | Biological process | peptidyl-serine dephosphorylation |
GO_0043409 | Biological process | negative regulation of MAPK cascade |
GO_1990869 | Biological process | cellular response to chemokine |
GO_0043407 | Biological process | negative regulation of MAP kinase activity |
GO_0001706 | Biological process | endoderm formation |
GO_0090027 | Biological process | negative regulation of monocyte chemotaxis |
GO_0090266 | Biological process | regulation of mitotic cell cycle spindle assembly checkpoint |
GO_1903753 | Biological process | negative regulation of p38MAPK cascade |
GO_0005634 | Cellular component | nucleus |
GO_0005737 | Cellular component | cytoplasm |
GO_0017018 | Molecular function | myosin phosphatase activity |
GO_0017017 | Molecular function | MAP kinase tyrosine/serine/threonine phosphatase activity |
GO_0008138 | Molecular function | protein tyrosine/serine/threonine phosphatase activity |
GO_0051019 | Molecular function | mitogen-activated protein kinase binding |
GO_0008330 | Molecular function | protein tyrosine/threonine phosphatase activity |
GO_0004722 | Molecular function | protein serine/threonine phosphatase activity |
GO_0033550 | Molecular function | MAP kinase tyrosine phosphatase activity |
GO_0005515 | Molecular function | protein binding |
GO_0004725 | Molecular function | protein tyrosine phosphatase activity |
Gene name | DUSP1 |
Protein name | Dual specificity protein phosphatase 1 (EC 3.1.3.16) (EC 3.1.3.48) (Dual specificity protein phosphatase hVH1) (Mitogen-activated protein kinase phosphatase 1) (MAP kinase phosphatase 1) (MKP-1) (Protein-tyrosine phosphatase CL100) |
Synonyms | CL100 VH1 PTPN10 MKP1 |
Description | FUNCTION: Dual specificity phosphatase that dephosphorylates MAP kinase MAPK1/ERK2 on both 'Thr-183' and 'Tyr-185', regulating its activity during the meiotic cell cycle. . |
Accessions | P28562 ENST00000239223.4 |