CD99 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
endothelial cell	45 studies	51% ± 23%	Explore
fibroblast	42 studies	59% ± 22%	Explore
natural killer cell	41 studies	62% ± 20%	Explore
CD8-positive, alpha-beta T cell	39 studies	58% ± 21%	Explore
macrophage	35 studies	43% ± 16%	Explore
B cell	33 studies	38% ± 13%	Explore
T cell	33 studies	52% ± 21%	Explore
pericyte	32 studies	53% ± 22%	Explore
CD4-positive, alpha-beta T cell	32 studies	55% ± 18%	Explore
smooth muscle cell	29 studies	49% ± 18%	Explore
endothelial cell of lymphatic vessel	27 studies	65% ± 23%	Explore
regulatory T cell	26 studies	54% ± 18%	Explore
classical monocyte	25 studies	55% ± 16%	Explore
plasmacytoid dendritic cell	25 studies	68% ± 18%	Explore
conventional dendritic cell	24 studies	45% ± 20%	Explore
mature NK T cell	24 studies	65% ± 20%	Explore
mast cell	22 studies	43% ± 16%	Explore
gamma-delta T cell	20 studies	71% ± 18%	Explore
memory B cell	20 studies	45% ± 14%	Explore
epithelial cell	20 studies	46% ± 20%	Explore
basal cell	19 studies	39% ± 21%	Explore
connective tissue cell	18 studies	63% ± 19%	Explore
monocyte	17 studies	35% ± 14%	Explore
CD16-negative, CD56-bright natural killer cell, human	17 studies	53% ± 19%	Explore
mucosal invariant T cell	17 studies	59% ± 22%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	16 studies	42% ± 13%	Explore
CD16-positive, CD56-dim natural killer cell, human	16 studies	73% ± 21%	Explore
naive B cell	16 studies	31% ± 11%	Explore
dendritic cell	15 studies	49% ± 24%	Explore
plasma cell	15 studies	47% ± 15%	Explore
ciliated cell	15 studies	43% ± 21%	Explore
endothelial cell of artery	15 studies	60% ± 25%	Explore
capillary endothelial cell	14 studies	56% ± 20%	Explore
myofibroblast cell	14 studies	58% ± 21%	Explore
endothelial cell of vascular tree	14 studies	51% ± 18%	Explore
myeloid cell	14 studies	44% ± 18%	Explore
effector memory CD8-positive, alpha-beta T cell	13 studies	64% ± 23%	Explore
non-classical monocyte	13 studies	26% ± 8%	Explore
vein endothelial cell	13 studies	62% ± 19%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	12 studies	52% ± 18%	Explore
plasmablast	12 studies	52% ± 20%	Explore
CD4-positive, alpha-beta memory T cell	12 studies	66% ± 16%	Explore
CD8-positive, alpha-beta memory T cell	12 studies	73% ± 16%	Explore
mesothelial cell	11 studies	60% ± 23%	Explore
type I pneumocyte	10 studies	36% ± 14%	Explore
platelet	10 studies	68% ± 9%	Explore
secretory cell	10 studies	43% ± 20%	Explore
leukocyte	10 studies	41% ± 14%	Explore
progenitor cell	10 studies	49% ± 18%	Explore
abnormal cell	9 studies	38% ± 20%	Explore
astrocyte	9 studies	27% ± 10%	Explore
hematopoietic stem cell	9 studies	64% ± 23%	Explore
innate lymphoid cell	8 studies	46% ± 16%	Explore
T follicular helper cell	8 studies	48% ± 11%	Explore
alveolar macrophage	7 studies	40% ± 16%	Explore
effector CD8-positive, alpha-beta T cell	7 studies	79% ± 18%	Explore
mononuclear phagocyte	7 studies	36% ± 12%	Explore
transit amplifying cell	7 studies	38% ± 15%	Explore
lymphocyte	7 studies	57% ± 23%	Explore
erythrocyte	7 studies	38% ± 16%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	6 studies	69% ± 21%	Explore
effector CD4-positive, alpha-beta T cell	6 studies	75% ± 23%	Explore
enterocyte	6 studies	28% ± 7%	Explore
goblet cell	6 studies	35% ± 15%	Explore
intestinal crypt stem cell	6 studies	37% ± 12%	Explore
cardiac muscle cell	6 studies	26% ± 4%	Explore
effector memory CD4-positive, alpha-beta T cell	6 studies	70% ± 20%	Explore
CD4-positive helper T cell	5 studies	49% ± 15%	Explore
CD4-positive, alpha-beta cytotoxic T cell	5 studies	70% ± 28%	Explore
central memory CD8-positive, alpha-beta T cell	5 studies	67% ± 17%	Explore
exhausted T cell	5 studies	79% ± 8%	Explore
enteroendocrine cell	5 studies	44% ± 18%	Explore
precursor B cell	5 studies	46% ± 30%	Explore
pro-B cell	5 studies	82% ± 10%	Explore
T-helper 17 cell	5 studies	66% ± 20%	Explore
group 3 innate lymphoid cell	5 studies	54% ± 16%	Explore
double negative thymocyte	5 studies	81% ± 17%	Explore
adipocyte	5 studies	34% ± 26%	Explore
granulocyte	5 studies	40% ± 14%	Explore
microglial cell	5 studies	35% ± 13%	Explore
melanocyte	5 studies	64% ± 18%	Explore
hematopoietic precursor cell	4 studies	84% ± 11%	Explore
squamous epithelial cell	4 studies	38% ± 19%	Explore
glomerular endothelial cell	4 studies	63% ± 9%	Explore
adventitial cell	4 studies	64% ± 10%	Explore
glial cell	4 studies	43% ± 21%	Explore
chondrocyte	4 studies	44% ± 23%	Explore
endothelial cell of sinusoid	4 studies	40% ± 23%	Explore
muscle cell	4 studies	44% ± 21%	Explore
intermediate monocyte	4 studies	62% ± 20%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	33% ± 6%	Explore
neuron	4 studies	28% ± 13%	Explore
luminal cell of prostate epithelium	4 studies	52% ± 14%	Explore
T-helper 1 cell	4 studies	73% ± 14%	Explore
club cell	3 studies	35% ± 21%	Explore
precursor cell	3 studies	59% ± 9%	Explore
monocyte-derived dendritic cell	3 studies	45% ± 22%	Explore
neural crest cell	3 studies	42% ± 6%	Explore
extravillous trophoblast	3 studies	28% ± 9%	Explore
placental villous trophoblast	3 studies	40% ± 13%	Explore
common myeloid progenitor	3 studies	54% ± 30%	Explore
erythroblast	3 studies	59% ± 23%	Explore
megakaryocyte	3 studies	48% ± 18%	Explore
Schwann cell	3 studies	58% ± 25%	Explore
type II pneumocyte	3 studies	42% ± 21%	Explore
serous secreting cell	3 studies	29% ± 12%	Explore
intraepithelial lymphocyte	3 studies	68% ± 14%	Explore
neutrophil	3 studies	20% ± 4%	Explore
germinal center B cell	3 studies	35% ± 7%	Explore
megakaryocyte-erythroid progenitor cell	3 studies	61% ± 30%	Explore
keratinocyte	3 studies	33% ± 4%	Explore
immature B cell	3 studies	50% ± 31%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	61% ± 17%	Explore
double-positive, alpha-beta thymocyte	3 studies	85% ± 12%	Explore
IgA plasma cell	3 studies	31% ± 17%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
peripheral blood	20 studies	57% ± 15%	Explore
lung	17 studies	46% ± 17%	Explore
intestine	12 studies	37% ± 17%	Explore
kidney	7 studies	41% ± 20%	Explore
heart	6 studies	29% ± 8%	Explore
placenta	5 studies	42% ± 9%	Explore
uterus	5 studies	52% ± 21%	Explore
prostate	5 studies	37% ± 10%	Explore
lymph node	5 studies	47% ± 14%	Explore
liver	5 studies	46% ± 9%	Explore
bone marrow	4 studies	51% ± 24%	Explore
adipose	4 studies	40% ± 18%	Explore
esophagus	4 studies	42% ± 29%	Explore
skin	4 studies	42% ± 18%	Explore
breast	4 studies	42% ± 8%	Explore
adrenal gland	3 studies	39% ± 22%	Explore
stomach	3 studies	39% ± 32%	Explore
thymus	3 studies	69% ± 35%	Explore
brain	3 studies	34% ± 16%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	100%	15419.91	245 / 245	100%	201.93	502 / 502
skin	100%	17876.30	1809 / 1809	100%	240.27	471 / 472
lung	100%	14093.13	578 / 578	99%	131.61	1142 / 1155
liver	99%	6481.38	224 / 226	99%	105.87	403 / 406
pancreas	99%	6923.65	326 / 328	99%	179.21	176 / 178
uterus	100%	17016.12	170 / 170	98%	164.05	451 / 459
intestine	100%	15331.47	966 / 966	98%	116.64	514 / 527
breast	100%	17842.32	457 / 459	97%	134.47	1090 / 1118
thymus	99%	8924.21	648 / 653	98%	154.11	591 / 605
esophagus	100%	13705.11	1445 / 1445	97%	82.88	177 / 183
bladder	100%	16159.19	21 / 21	96%	143.48	485 / 504
stomach	97%	9403.98	349 / 359	98%	109.74	281 / 286
ovary	100%	15464.99	180 / 180	94%	84.37	406 / 430
adrenal gland	99%	7332.40	255 / 258	92%	87.63	212 / 230
kidney	88%	5313.38	78 / 89	88%	91.14	797 / 901
brain	73%	4633.66	1927 / 2642	97%	313.18	682 / 705
adipose	100%	22629.23	1204 / 1204	0%	0	0 / 0
blood vessel	100%	22548.91	1335 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	100%	138.03	80 / 80
spleen	100%	9949.04	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	147.65	45 / 45
ureter	0%	0	0 / 0	100%	75.58	1 / 1
heart	99%	11658.59	855 / 861	0%	0	0 / 0
lymph node	0%	0	0 / 0	97%	127.16	28 / 29
peripheral blood	94%	7237.43	877 / 929	0%	0	0 / 0
muscle	93%	5532.32	743 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

IV. Literature review

[source]

Gene name	CD99
Protein name	CD99 molecule (Xg blood group) CD99 antigen (12E7) (E2 antigen) (Protein MIC2) (T-cell surface glycoprotein E2) (CD antigen CD99)
Synonyms	MIC2 MIC2Y MIC2X
Description	FUNCTION: Involved in T-cell adhesion processes and in spontaneous rosette formation with erythrocytes. Plays a role in a late step of leukocyte extravasation helping leukocytes to overcome the endothelial basement membrane. Acts at the same site as, but independently of, PECAM1. Involved in T-cell adhesion processes (By similarity). .
Accessions	ENST00000711155.1 [P14209-2] ENST00000711156.1 ENST00000611428.5 [P14209-2] ENST00000711163.1 A6NGF6 ENST00000381187.8 [P14209-3] P14209 ENST00000381192.10 [P14209-1] ENST00000482405.7 [P14209-2] ENST00000624481.4 ENST00000711159.1 [P14209-2] ENST00000711151.1 ENST00000623253.4 [P14209-2] ENST00000711165.1 [P14209-2] A0A096LP69 ENST00000711158.1 A8MQT7 ENST00000381184.6 ENST00000711164.1 [P14209-3] ENST00000711160.1 [P14209-1] ENST00000381180.9 A6NJT9 ENST00000381177.7

GO_0034109	Biological process	homotypic cell-cell adhesion
GO_0072683	Biological process	T cell extravasation
GO_2000391	Biological process	positive regulation of neutrophil extravasation
GO_0005886	Cellular component	plasma membrane
GO_0005737	Cellular component	cytoplasm
GO_0005925	Cellular component	focal adhesion
GO_0005515	Molecular function	protein binding

CD99 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review