Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 19 studies | 29% ± 13% | |
peripheral blood | 15 studies | 24% ± 7% | |
brain | 15 studies | 32% ± 20% | |
eye | 8 studies | 25% ± 11% | |
kidney | 7 studies | 25% ± 9% | |
liver | 6 studies | 29% ± 16% | |
intestine | 5 studies | 23% ± 8% | |
pancreas | 4 studies | 42% ± 24% | |
heart | 4 studies | 17% ± 2% | |
breast | 4 studies | 23% ± 3% | |
adipose | 4 studies | 27% ± 8% | |
placenta | 3 studies | 47% ± 15% | |
bone marrow | 3 studies | 22% ± 7% | |
uterus | 3 studies | 41% ± 15% | |
prostate | 3 studies | 28% ± 6% | |
lymph node | 3 studies | 18% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 13685.12 | 1445 / 1445 | 100% | 111.61 | 183 / 183 |
lung | 100% | 22095.08 | 578 / 578 | 100% | 149.03 | 1155 / 1155 |
stomach | 100% | 13060.27 | 359 / 359 | 100% | 143.54 | 285 / 286 |
breast | 100% | 20391.15 | 459 / 459 | 100% | 166.88 | 1113 / 1118 |
pancreas | 100% | 12807.54 | 328 / 328 | 99% | 107.97 | 177 / 178 |
prostate | 100% | 19248.54 | 245 / 245 | 99% | 141.83 | 499 / 502 |
intestine | 100% | 13368.30 | 966 / 966 | 99% | 164.44 | 523 / 527 |
bladder | 100% | 14590.52 | 21 / 21 | 99% | 131.88 | 497 / 504 |
kidney | 100% | 13609.53 | 89 / 89 | 98% | 95.11 | 879 / 901 |
thymus | 100% | 12762.69 | 653 / 653 | 97% | 78.86 | 587 / 605 |
adrenal gland | 100% | 33835.73 | 258 / 258 | 96% | 106.21 | 221 / 230 |
ovary | 100% | 14296.70 | 180 / 180 | 96% | 56.84 | 413 / 430 |
uterus | 100% | 14444.48 | 170 / 170 | 96% | 91.09 | 440 / 459 |
liver | 100% | 9364.52 | 226 / 226 | 94% | 74.63 | 382 / 406 |
skin | 100% | 11106.29 | 1806 / 1809 | 86% | 51.27 | 404 / 472 |
brain | 94% | 4936.87 | 2484 / 2642 | 64% | 20.02 | 454 / 705 |
adipose | 100% | 17876.26 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 12539.31 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 53.52 | 1 / 1 |
blood vessel | 100% | 14868.75 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 6414.27 | 845 / 861 | 0% | 0 | 0 / 0 |
muscle | 98% | 5185.98 | 787 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 85.07 | 44 / 45 |
peripheral blood | 86% | 8834.21 | 798 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 66% | 28.70 | 19 / 29 |
eye | 0% | 0 | 0 / 0 | 45% | 17.75 | 36 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0071636 | Biological process | positive regulation of transforming growth factor beta production |
GO_0042102 | Biological process | positive regulation of T cell proliferation |
GO_0010629 | Biological process | negative regulation of gene expression |
GO_0043382 | Biological process | positive regulation of memory T cell differentiation |
GO_0045087 | Biological process | innate immune response |
GO_0035581 | Biological process | sequestering of extracellular ligand from receptor |
GO_0010628 | Biological process | positive regulation of gene expression |
GO_0008593 | Biological process | regulation of Notch signaling pathway |
GO_0032733 | Biological process | positive regulation of interleukin-10 production |
GO_0045959 | Biological process | negative regulation of complement activation, classical pathway |
GO_0002250 | Biological process | adaptive immune response |
GO_0046718 | Biological process | symbiont entry into host cell |
GO_0006958 | Biological process | complement activation, classical pathway |
GO_0007338 | Biological process | single fertilization |
GO_0002456 | Biological process | T cell mediated immunity |
GO_0045591 | Biological process | positive regulation of regulatory T cell differentiation |
GO_0005615 | Cellular component | extracellular space |
GO_0005886 | Cellular component | plasma membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005925 | Cellular component | focal adhesion |
GO_0009986 | Cellular component | cell surface |
GO_0002079 | Cellular component | inner acrosomal membrane |
GO_0038023 | Molecular function | signaling receptor activity |
GO_0045296 | Molecular function | cadherin binding |
GO_0001618 | Molecular function | virus receptor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | CD46 |
Protein name | Membrane cofactor protein Complement system membrane cofactor protein CD46 Membrane cofactor protein (TLX) (Trophoblast leukocyte common antigen) (CD antigen CD46) CD46 molecule |
Synonyms | MIC10 MCP hCG_1987002 |
Description | FUNCTION: Acts as a cofactor for complement factor I, a serine protease which protects autologous cells against complement-mediated injury by cleaving C3b and C4b deposited on host tissue. May be involved in the fusion of the spermatozoa with the oocyte during fertilization. Also acts as a costimulatory factor for T-cells which induces the differentiation of CD4+ into T-regulatory 1 cells. T-regulatory 1 cells suppress immune responses by secreting interleukin-10, and therefore are thought to prevent autoimmunity. .; FUNCTION: (Microbial infection) A number of viral and bacterial pathogens seem to bind MCP in order to exploit its immune regulation property and directly induce an immunosuppressive phenotype in T-cells.; FUNCTION: (Microbial infection) Acts as a receptor for Adenovirus subgroup B2 and Ad3. .; FUNCTION: (Microbial infection) Acts as a receptor for cultured Measles virus. .; FUNCTION: (Microbial infection) Acts as a receptor for Herpesvirus 6/HHV-6. .; FUNCTION: (Microbial infection) May act as a receptor for pathogenic bacteria Neisseria and Streptococcus pyogenes . FUNCTION: Acts as a cofactor for complement factor I, a serine protease which protects autologous cells against complement-mediated injury by cleaving C3b and C4b deposited on host tissue. May be involved in the fusion of the spermatozoa with the oocyte during fertilization. Also acts as a costimulatory factor for T-cells which induces the differentiation of CD4+ into T-regulatory 1 cells. T-regulatory 1 cells suppress immune responses by secreting interleukin-10, and therefore are thought to prevent autoimmunity. . FUNCTION: Acts as a cofactor for complement factor I, a serine protease which protects autologous cells against complement-mediated injury by cleaving C3b and C4b deposited on host tissue. May be involved in the fusion of the spermatozoa with the oocyte during fertilization. Also acts as a costimulatory factor for T-cells which induces the differentiation of CD4+ into T-regulatory 1 cells. T-regulatory 1 cells suppress immune responses by secreting interleukin-10, and therefore are thought to prevent autoimmunity. . FUNCTION: Acts as a cofactor for complement factor I, a serine protease which protects autologous cells against complement-mediated injury by cleaving C3b and C4b deposited on host tissue. May be involved in the fusion of the spermatozoa with the oocyte during fertilization. Also acts as a costimulatory factor for T-cells which induces the differentiation of CD4+ into T-regulatory 1 cells. T-regulatory 1 cells suppress immune responses by secreting interleukin-10, and therefore are thought to prevent autoimmunity. . FUNCTION: Acts as a cofactor for complement factor I, a serine protease which protects autologous cells against complement-mediated injury by cleaving C3b and C4b deposited on host tissue. May be involved in the fusion of the spermatozoa with the oocyte during fertilization. Also acts as a costimulatory factor for T-cells which induces the differentiation of CD4+ into T-regulatory 1 cells. T-regulatory 1 cells suppress immune responses by secreting interleukin-10, and therefore are thought to prevent autoimmunity. . FUNCTION: Acts as a cofactor for complement factor I, a serine protease which protects autologous cells against complement-mediated injury by cleaving C3b and C4b deposited on host tissue. May be involved in the fusion of the spermatozoa with the oocyte during fertilization. Also acts as a costimulatory factor for T-cells which induces the differentiation of CD4+ into T-regulatory 1 cells. T-regulatory 1 cells suppress immune responses by secreting interleukin-10, and therefore are thought to prevent autoimmunity. . FUNCTION: Acts as a cofactor for complement factor I, a serine protease which protects autologous cells against complement-mediated injury by cleaving C3b and C4b deposited on host tissue. May be involved in the fusion of the spermatozoa with the oocyte during fertilization. Also acts as a costimulatory factor for T-cells which induces the differentiation of CD4+ into T-regulatory 1 cells. T-regulatory 1 cells suppress immune responses by secreting interleukin-10, and therefore are thought to prevent autoimmunity. . |
Accessions | P15529 ENST00000367042.6 [P15529-11] ENST00000695778.1 ENST00000480003.5 [P15529-6] ENST00000367041.5 [P15529-12] ENST00000322918.9 [P15529-9] ENST00000360212.6 [P15529-7] ENST00000357714.5 [P15529-4] ENST00000462968.2 A0A8Q3WKW1 A0A8Q3WKS6 ENST00000358170.6 [P15529-1] ENST00000367047.5 [P15529-16] ENST00000695777.1 ENST00000695782.1 ENST00000695781.1 A0A8Q3WLA6 ENST00000354848.5 [P15529-3] ENST00000695780.1 ENST00000695784.1 R4GN18 Q06C42 A0A8Q3WLU6 A0A8Q3WKR0 A0A8Q3WKR4 ENST00000322875.8 [P15529-2] |