Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 17 studies | 27% ± 8% | |
lung | 14 studies | 32% ± 17% | |
kidney | 8 studies | 26% ± 9% | |
intestine | 8 studies | 26% ± 12% | |
lymph node | 5 studies | 30% ± 5% | |
pancreas | 4 studies | 39% ± 9% | |
prostate | 4 studies | 36% ± 12% | |
breast | 4 studies | 31% ± 8% | |
placenta | 3 studies | 32% ± 7% | |
uterus | 3 studies | 38% ± 17% | |
thymus | 3 studies | 41% ± 15% | |
brain | 3 studies | 18% ± 2% | |
liver | 3 studies | 28% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 3340.92 | 653 / 653 | 100% | 220.05 | 604 / 605 |
prostate | 99% | 2296.48 | 243 / 245 | 100% | 194.68 | 501 / 502 |
pancreas | 100% | 1108.14 | 328 / 328 | 98% | 73.05 | 174 / 178 |
ovary | 97% | 1123.31 | 174 / 180 | 99% | 118.34 | 427 / 430 |
breast | 96% | 1303.93 | 440 / 459 | 99% | 167.18 | 1106 / 1118 |
lung | 99% | 1093.07 | 570 / 578 | 95% | 71.12 | 1102 / 1155 |
kidney | 100% | 2196.72 | 89 / 89 | 92% | 49.57 | 830 / 901 |
liver | 99% | 834.31 | 224 / 226 | 92% | 64.52 | 374 / 406 |
stomach | 96% | 953.47 | 346 / 359 | 86% | 52.16 | 247 / 286 |
esophagus | 90% | 849.28 | 1307 / 1445 | 89% | 42.15 | 162 / 183 |
intestine | 82% | 848.71 | 792 / 966 | 95% | 73.02 | 502 / 527 |
adrenal gland | 100% | 1473.74 | 258 / 258 | 63% | 30.45 | 144 / 230 |
bladder | 57% | 586.43 | 12 / 21 | 96% | 111.41 | 484 / 504 |
uterus | 27% | 130.89 | 46 / 170 | 90% | 86.76 | 414 / 459 |
spleen | 100% | 909.88 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 86.30 | 1 / 1 |
lymph node | 0% | 0 | 0 / 0 | 97% | 95.92 | 28 / 29 |
skin | 75% | 1041.36 | 1355 / 1809 | 21% | 9.78 | 99 / 472 |
brain | 74% | 520.39 | 1953 / 2642 | 22% | 9.95 | 153 / 705 |
tonsil | 0% | 0 | 0 / 0 | 96% | 58.57 | 43 / 45 |
peripheral blood | 93% | 925.01 | 864 / 929 | 0% | 0 | 0 / 0 |
adipose | 79% | 484.21 | 950 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 78% | 479.65 | 1047 / 1335 | 0% | 0 | 0 / 0 |
muscle | 74% | 381.80 | 595 / 803 | 0% | 0 | 0 / 0 |
heart | 72% | 465.88 | 620 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 4% | 1.18 | 3 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0070221 | Biological process | sulfide oxidation, using sulfide:quinone oxidoreductase |
GO_0006006 | Biological process | glucose metabolic process |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0005829 | Cellular component | cytosol |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0005737 | Cellular component | cytoplasm |
GO_0036464 | Cellular component | cytoplasmic ribonucleoprotein granule |
GO_0044877 | Molecular function | protein-containing complex binding |
GO_0003690 | Molecular function | double-stranded DNA binding |
GO_0042802 | Molecular function | identical protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0050337 | Molecular function | thiosulfate-thiol sulfurtransferase activity |
GO_0043565 | Molecular function | sequence-specific DNA binding |
Gene name | TSTD1 |
Protein name | Thiosulfate sulfurtransferase like domain containing 1 Thiosulfate:glutathione sulfurtransferase (TST) (EC 2.8.1.-) |
Synonyms | KAT |
Description | FUNCTION: Thiosulfate:glutathione sulfurtransferase (TST) required to produce S-sulfanylglutathione (GSS(-)), a central intermediate in hydrogen sulfide metabolism . Provides the link between the first step in mammalian H(2)S metabolism performed by the sulfide:quinone oxidoreductase (SQOR) which catalyzes the conversion of H(2)S to thiosulfate, and the sulfur dioxygenase (SDO) which uses GSS(-) as substrate . The thermodynamic coupling of the irreversible SDO and reversible TST reactions provides a model for the physiologically relevant reaction with thiosulfate as the sulfane donor . . |
Accessions | R4GNF9 ENST00000466967.1 ENST00000368023.7 [Q8NFU3-4] Q8NFU3 ENST00000318289.14 [Q8NFU3-3] ENST00000423014.3 [Q8NFU3-1] ENST00000368024.5 [Q8NFU3-2] |