TMEM50A | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
natural killer cell	36 studies	37% ± 11%	Explore
endothelial cell	36 studies	41% ± 16%	Explore
fibroblast	34 studies	36% ± 13%	Explore
macrophage	32 studies	37% ± 14%	Explore
CD8-positive, alpha-beta T cell	32 studies	38% ± 15%	Explore
pericyte	30 studies	39% ± 13%	Explore
B cell	29 studies	23% ± 8%	Explore
CD4-positive, alpha-beta T cell	29 studies	36% ± 14%	Explore
T cell	27 studies	34% ± 10%	Explore
conventional dendritic cell	26 studies	37% ± 15%	Explore
classical monocyte	25 studies	37% ± 14%	Explore
regulatory T cell	25 studies	42% ± 14%	Explore
non-classical monocyte	23 studies	46% ± 14%	Explore
endothelial cell of lymphatic vessel	22 studies	53% ± 19%	Explore
smooth muscle cell	22 studies	32% ± 9%	Explore
plasmacytoid dendritic cell	21 studies	45% ± 13%	Explore
epithelial cell	20 studies	34% ± 21%	Explore
monocyte	19 studies	34% ± 10%	Explore
mature NK T cell	18 studies	39% ± 9%	Explore
basal cell	18 studies	36% ± 19%	Explore
connective tissue cell	18 studies	33% ± 11%	Explore
dendritic cell	17 studies	40% ± 22%	Explore
memory B cell	17 studies	24% ± 6%	Explore
gamma-delta T cell	17 studies	39% ± 13%	Explore
ciliated cell	16 studies	40% ± 20%	Explore
mast cell	15 studies	29% ± 5%	Explore
naive B cell	15 studies	24% ± 6%	Explore
CD16-negative, CD56-bright natural killer cell, human	14 studies	36% ± 11%	Explore
mucosal invariant T cell	14 studies	36% ± 13%	Explore
CD16-positive, CD56-dim natural killer cell, human	14 studies	43% ± 11%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	13 studies	31% ± 7%	Explore
capillary endothelial cell	13 studies	41% ± 11%	Explore
myofibroblast cell	13 studies	29% ± 10%	Explore
plasma cell	12 studies	37% ± 11%	Explore
CD8-positive, alpha-beta memory T cell	12 studies	43% ± 14%	Explore
endothelial cell of artery	12 studies	40% ± 12%	Explore
myeloid cell	12 studies	40% ± 14%	Explore
CD4-positive, alpha-beta memory T cell	11 studies	42% ± 15%	Explore
secretory cell	11 studies	40% ± 18%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	11 studies	41% ± 9%	Explore
vein endothelial cell	11 studies	36% ± 8%	Explore
endothelial cell of vascular tree	11 studies	36% ± 10%	Explore
plasmablast	10 studies	41% ± 25%	Explore
platelet	10 studies	45% ± 13%	Explore
effector memory CD8-positive, alpha-beta T cell	9 studies	43% ± 11%	Explore
type I pneumocyte	8 studies	39% ± 10%	Explore
innate lymphoid cell	8 studies	33% ± 8%	Explore
leukocyte	8 studies	31% ± 9%	Explore
goblet cell	8 studies	29% ± 13%	Explore
club cell	7 studies	36% ± 12%	Explore
effector CD8-positive, alpha-beta T cell	7 studies	50% ± 17%	Explore
progenitor cell	7 studies	20% ± 6%	Explore
abnormal cell	7 studies	29% ± 10%	Explore
mesothelial cell	7 studies	28% ± 14%	Explore
T follicular helper cell	7 studies	32% ± 8%	Explore
alveolar macrophage	6 studies	42% ± 12%	Explore
respiratory goblet cell	6 studies	33% ± 19%	Explore
effector CD4-positive, alpha-beta T cell	6 studies	52% ± 21%	Explore
megakaryocyte	6 studies	63% ± 21%	Explore
neuron	6 studies	32% ± 13%	Explore
oligodendrocyte	6 studies	23% ± 9%	Explore
astrocyte	6 studies	24% ± 12%	Explore
effector memory CD4-positive, alpha-beta T cell	6 studies	47% ± 20%	Explore
CD4-positive helper T cell	5 studies	29% ± 11%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	5 studies	40% ± 13%	Explore
hematopoietic precursor cell	5 studies	39% ± 16%	Explore
exhausted T cell	5 studies	53% ± 10%	Explore
neutrophil	5 studies	24% ± 2%	Explore
mononuclear phagocyte	5 studies	42% ± 11%	Explore
hematopoietic stem cell	5 studies	34% ± 13%	Explore
precursor B cell	5 studies	38% ± 9%	Explore
pro-B cell	5 studies	31% ± 6%	Explore
enterocyte	5 studies	20% ± 5%	Explore
type II pneumocyte	5 studies	30% ± 16%	Explore
central memory CD8-positive, alpha-beta T cell	4 studies	32% ± 17%	Explore
pancreatic A cell	4 studies	42% ± 15%	Explore
glomerular endothelial cell	4 studies	47% ± 3%	Explore
kidney distal convoluted tubule epithelial cell	4 studies	29% ± 4%	Explore
epithelial cell of proximal tubule	4 studies	21% ± 4%	Explore
kidney loop of Henle epithelial cell	4 studies	29% ± 10%	Explore
lymphocyte	4 studies	41% ± 16%	Explore
immature B cell	4 studies	26% ± 6%	Explore
microglial cell	4 studies	26% ± 9%	Explore
adventitial cell	4 studies	34% ± 4%	Explore
intermediate monocyte	4 studies	51% ± 19%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	46% ± 8%	Explore
granulocyte	4 studies	34% ± 14%	Explore
GABAergic neuron	4 studies	30% ± 7%	Explore
glutamatergic neuron	4 studies	43% ± 11%	Explore
oligodendrocyte precursor cell	4 studies	27% ± 7%	Explore
T-helper 17 cell	4 studies	45% ± 20%	Explore
erythrocyte	4 studies	32% ± 17%	Explore
CD4-positive, alpha-beta cytotoxic T cell	3 studies	48% ± 21%	Explore
duct epithelial cell	3 studies	37% ± 10%	Explore
ionocyte	3 studies	35% ± 12%	Explore
squamous epithelial cell	3 studies	49% ± 22%	Explore
type B pancreatic cell	3 studies	42% ± 8%	Explore
podocyte	3 studies	44% ± 3%	Explore
renal alpha-intercalated cell	3 studies	34% ± 5%	Explore
extravillous trophoblast	3 studies	52% ± 8%	Explore
retinal cone cell	3 studies	37% ± 16%	Explore
serous secreting cell	3 studies	33% ± 7%	Explore
intraepithelial lymphocyte	3 studies	38% ± 15%	Explore
Mueller cell	3 studies	32% ± 6%	Explore
rod bipolar cell	3 studies	22% ± 5%	Explore
endothelial cell of sinusoid	3 studies	31% ± 20%	Explore
erythroblast	3 studies	40% ± 18%	Explore
luminal cell of prostate epithelium	3 studies	36% ± 11%	Explore
pancreatic ductal cell	3 studies	67% ± 11%	Explore
enteroendocrine cell	3 studies	44% ± 13%	Explore
glial cell	3 studies	36% ± 12%	Explore
group 3 innate lymphoid cell	3 studies	42% ± 10%	Explore
keratinocyte	3 studies	32% ± 13%	Explore
interneuron	3 studies	28% ± 11%	Explore
T-helper 1 cell	3 studies	53% ± 15%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	38% ± 14%	Explore
double negative thymocyte	3 studies	55% ± 2%	Explore
progenitor cell of mammary luminal epithelium	3 studies	36% ± 8%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
peripheral blood	19 studies	37% ± 12%	Explore
lung	18 studies	37% ± 15%	Explore
intestine	11 studies	24% ± 11%	Explore
brain	10 studies	28% ± 10%	Explore
kidney	9 studies	28% ± 9%	Explore
eye	5 studies	27% ± 10%	Explore
lymph node	5 studies	29% ± 9%	Explore
pancreas	4 studies	43% ± 14%	Explore
bone marrow	4 studies	27% ± 7%	Explore
uterus	4 studies	42% ± 16%	Explore
prostate	4 studies	28% ± 9%	Explore
breast	4 studies	37% ± 6%	Explore
placenta	3 studies	35% ± 1%	Explore
adrenal gland	3 studies	36% ± 10%	Explore
liver	3 studies	43% ± 15%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	100%	5841.72	459 / 459	100%	166.48	1118 / 1118
esophagus	100%	5019.01	1445 / 1445	100%	120.70	183 / 183
lung	100%	5647.58	578 / 578	100%	135.26	1155 / 1155
ovary	100%	3362.44	180 / 180	100%	138.58	430 / 430
prostate	100%	4128.70	245 / 245	100%	160.53	502 / 502
skin	100%	6849.05	1809 / 1809	100%	129.86	472 / 472
stomach	100%	3578.34	359 / 359	100%	119.03	286 / 286
uterus	100%	4389.75	170 / 170	100%	129.51	459 / 459
brain	100%	3932.64	2640 / 2642	100%	104.65	705 / 705
thymus	100%	4825.55	653 / 653	100%	134.56	604 / 605
intestine	100%	5413.29	966 / 966	100%	120.24	526 / 527
bladder	100%	4702.14	21 / 21	100%	129.27	503 / 504
kidney	100%	4109.21	89 / 89	100%	122.10	899 / 901
adrenal gland	100%	7898.71	258 / 258	98%	83.92	226 / 230
pancreas	98%	2204.48	321 / 328	100%	135.62	178 / 178
liver	95%	1614.91	214 / 226	100%	65.67	404 / 406
adipose	100%	6414.98	1204 / 1204	0%	0	0 / 0
blood vessel	100%	6226.70	1335 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	109.04	29 / 29
spleen	100%	4326.80	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	124.23	45 / 45
ureter	0%	0	0 / 0	100%	77.36	1 / 1
heart	100%	3473.94	857 / 861	0%	0	0 / 0
peripheral blood	99%	5019.44	916 / 929	0%	0	0 / 0
eye	0%	0	0 / 0	98%	79.44	78 / 80
muscle	95%	1772.37	766 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_0032511	Biological process	late endosome to vacuole transport via multivesicular body sorting pathway
GO_0097386	Cellular component	glial cell projection
GO_0005783	Cellular component	endoplasmic reticulum
GO_0043025	Cellular component	neuronal cell body
GO_0016020	Cellular component	membrane
GO_0005515	Molecular function	protein binding

Gene name	TMEM50A
Protein name	Transmembrane protein 50A (Small membrane protein 1) Cervical cancer oncogene 9 (Small membrane protein 1) (Transmembrane protein 50A)
Synonyms	hCG_23247 UNQ386/PRO718 SMP1
Description
Accessions	Q7RU07 ENST00000374358.5 O95807

TMEM50A report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review