SYNGR2 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
B cell	37 studies	46% ± 19%	Explore
macrophage	35 studies	42% ± 19%	Explore
conventional dendritic cell	28 studies	54% ± 19%	Explore
classical monocyte	25 studies	36% ± 15%	Explore
non-classical monocyte	23 studies	57% ± 20%	Explore
dendritic cell	22 studies	59% ± 27%	Explore
plasmacytoid dendritic cell	21 studies	53% ± 17%	Explore
memory B cell	20 studies	62% ± 17%	Explore
naive B cell	20 studies	50% ± 16%	Explore
regulatory T cell	20 studies	34% ± 14%	Explore
monocyte	18 studies	34% ± 12%	Explore
endothelial cell	17 studies	35% ± 15%	Explore
CD4-positive, alpha-beta T cell	17 studies	27% ± 13%	Explore
plasma cell	15 studies	44% ± 16%	Explore
CD8-positive, alpha-beta T cell	15 studies	29% ± 11%	Explore
natural killer cell	14 studies	24% ± 9%	Explore
basal cell	13 studies	36% ± 18%	Explore
epithelial cell	13 studies	42% ± 19%	Explore
secretory cell	11 studies	33% ± 12%	Explore
gamma-delta T cell	11 studies	26% ± 2%	Explore
endothelial cell of artery	10 studies	37% ± 14%	Explore
myeloid cell	10 studies	46% ± 18%	Explore
type I pneumocyte	9 studies	44% ± 15%	Explore
plasmablast	9 studies	45% ± 25%	Explore
T cell	9 studies	23% ± 5%	Explore
goblet cell	9 studies	45% ± 11%	Explore
mucosal invariant T cell	9 studies	26% ± 3%	Explore
mast cell	9 studies	28% ± 14%	Explore
CD16-positive, CD56-dim natural killer cell, human	8 studies	24% ± 4%	Explore
CD16-negative, CD56-bright natural killer cell, human	8 studies	27% ± 6%	Explore
endothelial cell of lymphatic vessel	8 studies	29% ± 6%	Explore
type II pneumocyte	8 studies	37% ± 18%	Explore
vein endothelial cell	8 studies	34% ± 17%	Explore
endothelial cell of vascular tree	8 studies	27% ± 8%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	8 studies	26% ± 5%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	8 studies	26% ± 4%	Explore
alveolar macrophage	7 studies	39% ± 15%	Explore
CD4-positive, alpha-beta memory T cell	7 studies	35% ± 11%	Explore
CD8-positive, alpha-beta memory T cell	7 studies	27% ± 7%	Explore
club cell	7 studies	39% ± 13%	Explore
capillary endothelial cell	7 studies	36% ± 13%	Explore
ciliated cell	7 studies	34% ± 13%	Explore
hematopoietic precursor cell	6 studies	24% ± 7%	Explore
respiratory goblet cell	6 studies	46% ± 21%	Explore
effector CD8-positive, alpha-beta T cell	6 studies	28% ± 9%	Explore
effector memory CD8-positive, alpha-beta T cell	6 studies	24% ± 9%	Explore
mature NK T cell	6 studies	26% ± 4%	Explore
mononuclear phagocyte	5 studies	41% ± 13%	Explore
leukocyte	5 studies	23% ± 6%	Explore
transit amplifying cell	5 studies	24% ± 6%	Explore
erythroblast	5 studies	30% ± 10%	Explore
T follicular helper cell	5 studies	27% ± 5%	Explore
abnormal cell	5 studies	55% ± 14%	Explore
intestinal crypt stem cell	4 studies	20% ± 7%	Explore
immature B cell	4 studies	62% ± 2%	Explore
effector CD4-positive, alpha-beta T cell	4 studies	43% ± 7%	Explore
intermediate monocyte	4 studies	56% ± 14%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	39% ± 17%	Explore
inflammatory macrophage	4 studies	36% ± 19%	Explore
luminal cell of prostate epithelium	4 studies	27% ± 9%	Explore
effector memory CD4-positive, alpha-beta T cell	4 studies	34% ± 15%	Explore
fibroblast	4 studies	21% ± 2%	Explore
erythrocyte	4 studies	31% ± 11%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	4 studies	23% ± 6%	Explore
IgA plasma cell	4 studies	32% ± 13%	Explore
IgG plasma cell	4 studies	25% ± 12%	Explore
ionocyte	3 studies	33% ± 14%	Explore
squamous epithelial cell	3 studies	42% ± 22%	Explore
kidney loop of Henle epithelial cell	3 studies	31% ± 17%	Explore
common myeloid progenitor	3 studies	33% ± 21%	Explore
hematopoietic stem cell	3 studies	38% ± 12%	Explore
precursor B cell	3 studies	48% ± 29%	Explore
smooth muscle cell	3 studies	28% ± 4%	Explore
innate lymphoid cell	3 studies	24% ± 1%	Explore
microglial cell	3 studies	34% ± 7%	Explore
mucus secreting cell	3 studies	39% ± 10%	Explore
serous secreting cell	3 studies	31% ± 9%	Explore
oligodendrocyte	3 studies	29% ± 4%	Explore
germinal center B cell	3 studies	58% ± 12%	Explore
exhausted T cell	3 studies	41% ± 6%	Explore
granulocyte	3 studies	30% ± 12%	Explore
neutrophil	3 studies	20% ± 1%	Explore
enteroendocrine cell	3 studies	29% ± 10%	Explore
group 3 innate lymphoid cell	3 studies	23% ± 1%	Explore
keratinocyte	3 studies	25% ± 1%	Explore
double negative thymocyte	3 studies	25% ± 5%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
lung	15 studies	29% ± 12%	Explore
peripheral blood	15 studies	32% ± 9%	Explore
intestine	6 studies	20% ± 3%	Explore
kidney	4 studies	31% ± 14%	Explore
lymph node	4 studies	46% ± 20%	Explore
bone marrow	3 studies	23% ± 6%	Explore
liver	3 studies	29% ± 13%	Explore
prostate	3 studies	28% ± 5%	Explore
brain	3 studies	29% ± 9%	Explore
skin	3 studies	21% ± 5%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	7941.48	1445 / 1445	100%	176.77	183 / 183
prostate	100%	10430.56	245 / 245	100%	459.44	501 / 502
pancreas	100%	7636.29	328 / 328	99%	229.19	177 / 178
lung	100%	12017.52	578 / 578	99%	266.99	1147 / 1155
stomach	100%	7750.13	359 / 359	99%	246.80	284 / 286
thymus	100%	5635.14	652 / 653	99%	139.66	600 / 605
intestine	99%	6704.74	961 / 966	99%	302.12	524 / 527
bladder	100%	4548.14	21 / 21	99%	256.25	498 / 504
ovary	99%	3207.31	178 / 180	100%	217.70	429 / 430
breast	100%	7754.78	459 / 459	98%	253.06	1101 / 1118
uterus	100%	4449.14	170 / 170	97%	183.82	444 / 459
kidney	100%	6756.35	89 / 89	95%	144.44	853 / 901
liver	100%	3830.89	225 / 226	93%	104.26	378 / 406
adrenal gland	100%	4115.19	258 / 258	69%	45.95	159 / 230
skin	75%	7610.57	1355 / 1809	86%	78.27	406 / 472
brain	83%	2600.01	2190 / 2642	51%	39.41	363 / 705
adipose	100%	6180.10	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	410.60	29 / 29
muscle	100%	13951.08	803 / 803	0%	0	0 / 0
spleen	100%	10931.83	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	246.23	45 / 45
ureter	0%	0	0 / 0	100%	233.42	1 / 1
blood vessel	100%	6551.16	1333 / 1335	0%	0	0 / 0
peripheral blood	99%	14526.00	921 / 929	0%	0	0 / 0
heart	98%	5578.81	843 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	54%	29.23	43 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

IV. Literature review

[source]

Gene name	SYNGR2
Protein name	Synaptogyrin 2 Synaptogyrin-2 (Cellugyrin)
Synonyms	UNQ352/PRO615 hCG_27833
Description	FUNCTION: May play a role in regulated exocytosis. In neuronal cells, modulates the localization of synaptophysin/SYP into synaptic-like microvesicles and may therefore play a role in the formation and/or the maturation of this vesicles. May also play a role in GLUT4 storage and transport to the plasma membrane. .; FUNCTION: (Microbial infection) May play a role in the assembly of cytoplasmic inclusion bodies required for SFTS phlebovirus replication. .
Accessions	K7ENG9 ENST00000588282.5 [O43760-2] K7ELS8 ENST00000589183.1 ENST00000590201.1 ENST00000589711.1 K7ELD9 ENST00000589168.1 O43760 ENST00000585591.5 [O43760-1] ENST00000225777.8 [O43760-1] K7EJ35

GO_0045055	Biological process	regulated exocytosis
GO_0048499	Biological process	synaptic vesicle membrane organization
GO_0030672	Cellular component	synaptic vesicle membrane
GO_0070062	Cellular component	extracellular exosome
GO_0005811	Cellular component	lipid droplet
GO_0031594	Cellular component	neuromuscular junction
GO_0016020	Cellular component	membrane
GO_0005515	Molecular function	protein binding

SYNGR2 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review