PCNP | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
fibroblast	39 studies	29% ± 13%	Explore
endothelial cell	35 studies	29% ± 12%	Explore
B cell	32 studies	27% ± 9%	Explore
natural killer cell	30 studies	25% ± 6%	Explore
smooth muscle cell	27 studies	32% ± 11%	Explore
CD4-positive, alpha-beta T cell	27 studies	28% ± 7%	Explore
CD8-positive, alpha-beta T cell	26 studies	25% ± 6%	Explore
pericyte	25 studies	31% ± 13%	Explore
T cell	24 studies	26% ± 7%	Explore
regulatory T cell	20 studies	27% ± 7%	Explore
naive B cell	18 studies	26% ± 6%	Explore
memory B cell	18 studies	26% ± 6%	Explore
basal cell	17 studies	30% ± 13%	Explore
endothelial cell of lymphatic vessel	16 studies	27% ± 10%	Explore
gamma-delta T cell	16 studies	28% ± 11%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	14 studies	27% ± 8%	Explore
mature NK T cell	14 studies	24% ± 5%	Explore
myofibroblast cell	14 studies	32% ± 11%	Explore
epithelial cell	14 studies	36% ± 21%	Explore
mast cell	13 studies	24% ± 6%	Explore
macrophage	13 studies	23% ± 8%	Explore
CD16-negative, CD56-bright natural killer cell, human	12 studies	26% ± 6%	Explore
CD16-positive, CD56-dim natural killer cell, human	12 studies	24% ± 5%	Explore
conventional dendritic cell	12 studies	28% ± 15%	Explore
connective tissue cell	12 studies	37% ± 12%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	11 studies	29% ± 6%	Explore
capillary endothelial cell	11 studies	22% ± 4%	Explore
mucosal invariant T cell	11 studies	26% ± 7%	Explore
endothelial cell of vascular tree	11 studies	31% ± 7%	Explore
CD4-positive, alpha-beta memory T cell	10 studies	26% ± 7%	Explore
non-classical monocyte	10 studies	27% ± 13%	Explore
vein endothelial cell	10 studies	22% ± 5%	Explore
plasmacytoid dendritic cell	10 studies	24% ± 8%	Explore
CD8-positive, alpha-beta memory T cell	10 studies	28% ± 6%	Explore
classical monocyte	9 studies	26% ± 12%	Explore
monocyte	9 studies	21% ± 6%	Explore
abnormal cell	9 studies	29% ± 8%	Explore
type I pneumocyte	8 studies	25% ± 9%	Explore
plasma cell	8 studies	26% ± 12%	Explore
platelet	8 studies	27% ± 6%	Explore
endothelial cell of artery	8 studies	26% ± 5%	Explore
ciliated cell	8 studies	34% ± 15%	Explore
effector CD8-positive, alpha-beta T cell	7 studies	23% ± 6%	Explore
leukocyte	7 studies	24% ± 6%	Explore
effector memory CD8-positive, alpha-beta T cell	7 studies	29% ± 8%	Explore
type II pneumocyte	7 studies	23% ± 14%	Explore
astrocyte	7 studies	29% ± 11%	Explore
T follicular helper cell	7 studies	28% ± 5%	Explore
GABAergic neuron	7 studies	34% ± 18%	Explore
plasmablast	6 studies	37% ± 21%	Explore
kidney loop of Henle epithelial cell	6 studies	21% ± 4%	Explore
progenitor cell	6 studies	21% ± 6%	Explore
neuron	6 studies	35% ± 17%	Explore
mesothelial cell	6 studies	27% ± 18%	Explore
microglial cell	6 studies	21% ± 5%	Explore
dendritic cell	6 studies	32% ± 21%	Explore
precursor B cell	6 studies	29% ± 8%	Explore
innate lymphoid cell	6 studies	27% ± 5%	Explore
erythrocyte	6 studies	26% ± 17%	Explore
effector memory CD4-positive, alpha-beta T cell	6 studies	26% ± 11%	Explore
oligodendrocyte	6 studies	25% ± 6%	Explore
oligodendrocyte precursor cell	6 studies	30% ± 8%	Explore
hematopoietic precursor cell	5 studies	32% ± 17%	Explore
retinal rod cell	5 studies	34% ± 19%	Explore
hematopoietic stem cell	5 studies	25% ± 3%	Explore
lymphocyte	5 studies	27% ± 9%	Explore
pro-B cell	5 studies	30% ± 3%	Explore
myeloid cell	5 studies	28% ± 12%	Explore
glutamatergic neuron	5 studies	47% ± 24%	Explore
goblet cell	5 studies	33% ± 15%	Explore
secretory cell	5 studies	28% ± 10%	Explore
interneuron	5 studies	34% ± 21%	Explore
pancreatic A cell	4 studies	51% ± 17%	Explore
type B pancreatic cell	4 studies	50% ± 17%	Explore
mononuclear phagocyte	4 studies	29% ± 12%	Explore
exhausted T cell	4 studies	27% ± 6%	Explore
epithelial cell of proximal tubule	4 studies	21% ± 4%	Explore
glial cell	4 studies	29% ± 20%	Explore
ON-bipolar cell	4 studies	29% ± 14%	Explore
erythroblast	4 studies	38% ± 27%	Explore
club cell	4 studies	24% ± 5%	Explore
immature B cell	4 studies	23% ± 4%	Explore
amacrine cell	4 studies	42% ± 18%	Explore
retina horizontal cell	4 studies	39% ± 13%	Explore
Mueller cell	4 studies	28% ± 10%	Explore
effector CD4-positive, alpha-beta T cell	4 studies	27% ± 6%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	27% ± 3%	Explore
granulocyte	4 studies	24% ± 9%	Explore
T-helper 17 cell	4 studies	29% ± 8%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	4 studies	24% ± 6%	Explore
pancreatic D cell	3 studies	47% ± 20%	Explore
glomerular endothelial cell	3 studies	24% ± 4%	Explore
kidney distal convoluted tubule epithelial cell	3 studies	34% ± 10%	Explore
neural crest cell	3 studies	29% ± 7%	Explore
retinal bipolar neuron	3 studies	48% ± 20%	Explore
OFF-bipolar cell	3 studies	34% ± 13%	Explore
retinal ganglion cell	3 studies	70% ± 20%	Explore
extravillous trophoblast	3 studies	26% ± 7%	Explore
retinal cone cell	3 studies	60% ± 18%	Explore
rod bipolar cell	3 studies	32% ± 11%	Explore
acinar cell	3 studies	33% ± 13%	Explore
germinal center B cell	3 studies	30% ± 1%	Explore
pancreatic ductal cell	3 studies	47% ± 15%	Explore
megakaryocyte	3 studies	34% ± 3%	Explore
enteroendocrine cell	3 studies	35% ± 18%	Explore
intestinal crypt stem cell	3 studies	23% ± 2%	Explore
group 3 innate lymphoid cell	3 studies	38% ± 10%	Explore
melanocyte	3 studies	27% ± 2%	Explore
transit amplifying cell	3 studies	30% ± 9%	Explore
T-helper 1 cell	3 studies	30% ± 9%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	29% ± 10%	Explore
double negative thymocyte	3 studies	40% ± 12%	Explore
progenitor cell of mammary luminal epithelium	3 studies	19% ± 1%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
peripheral blood	15 studies	29% ± 8%	Explore
lung	13 studies	29% ± 14%	Explore
intestine	9 studies	26% ± 13%	Explore
brain	9 studies	33% ± 16%	Explore
kidney	8 studies	22% ± 4%	Explore
eye	8 studies	33% ± 15%	Explore
liver	5 studies	34% ± 25%	Explore
lymph node	5 studies	24% ± 5%	Explore
pancreas	4 studies	48% ± 19%	Explore
placenta	4 studies	20% ± 3%	Explore
bone marrow	4 studies	20% ± 3%	Explore
uterus	4 studies	32% ± 14%	Explore
breast	4 studies	25% ± 4%	Explore
skin	3 studies	27% ± 11%	Explore
thymus	3 studies	35% ± 15%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	100%	7861.59	459 / 459	100%	140.96	1118 / 1118
esophagus	100%	7021.76	1445 / 1445	100%	110.20	183 / 183
ovary	100%	8811.35	180 / 180	100%	145.27	430 / 430
uterus	100%	8807.41	170 / 170	100%	138.42	459 / 459
brain	100%	7254.47	2640 / 2642	100%	154.55	705 / 705
lung	100%	7072.56	577 / 578	100%	140.29	1155 / 1155
prostate	100%	7473.78	245 / 245	100%	128.20	501 / 502
thymus	100%	7253.73	653 / 653	100%	162.75	603 / 605
kidney	100%	5816.37	89 / 89	99%	131.01	892 / 901
pancreas	99%	3232.66	326 / 328	99%	103.97	177 / 178
bladder	100%	8111.71	21 / 21	99%	115.22	498 / 504
adrenal gland	100%	4937.69	258 / 258	98%	117.56	225 / 230
stomach	100%	4931.88	359 / 359	97%	103.37	278 / 286
intestine	100%	7192.19	966 / 966	97%	105.23	511 / 527
liver	100%	2436.34	225 / 226	97%	60.21	392 / 406
skin	100%	6437.63	1807 / 1809	94%	113.56	446 / 472
adipose	100%	7452.25	1204 / 1204	0%	0	0 / 0
blood vessel	100%	9762.05	1335 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	109.43	29 / 29
muscle	100%	5333.82	803 / 803	0%	0	0 / 0
spleen	100%	4942.00	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	134.39	45 / 45
ureter	0%	0	0 / 0	100%	39.81	1 / 1
heart	98%	4604.04	843 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	78%	56.10	62 / 80
peripheral blood	74%	3119.45	688 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_0016567	Biological process	protein ubiquitination
GO_0043161	Biological process	proteasome-mediated ubiquitin-dependent protein catabolic process
GO_0016604	Cellular component	nuclear body
GO_0005654	Cellular component	nucleoplasm
GO_0005634	Cellular component	nucleus
GO_0005515	Molecular function	protein binding

Gene name	PCNP
Protein name	PEST proteolytic signal containing nuclear protein PEST proteolytic signal-containing nuclear protein (PCNP) (PEST-containing nuclear protein)
Synonyms	hCG_2023069
Description	FUNCTION: May be involved in cell cycle regulation.
Accessions	ENST00000265260.8 [Q8WW12-1] ENST00000460231.5 ENST00000469941.5 [Q8WW12-3] A0A0B4J1Z9 G5E9V9 Q8WW12 ENST00000627393.1 ENST00000498274.5

PCNP report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review