Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 15 studies | 28% ± 7% | |
intestine | 6 studies | 21% ± 5% | |
lung | 5 studies | 30% ± 9% | |
liver | 5 studies | 18% ± 3% | |
kidney | 4 studies | 30% ± 6% | |
lymph node | 4 studies | 21% ± 5% | |
pancreas | 3 studies | 33% ± 9% | |
bone marrow | 3 studies | 25% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 10474.08 | 226 / 226 | 100% | 322.58 | 405 / 406 |
pancreas | 100% | 3441.78 | 327 / 328 | 97% | 146.59 | 173 / 178 |
kidney | 100% | 11932.28 | 89 / 89 | 96% | 246.08 | 868 / 901 |
prostate | 96% | 3228.73 | 234 / 245 | 97% | 155.36 | 489 / 502 |
brain | 99% | 4685.95 | 2625 / 2642 | 90% | 90.34 | 636 / 705 |
breast | 87% | 3293.26 | 399 / 459 | 99% | 572.40 | 1104 / 1118 |
stomach | 90% | 4064.36 | 324 / 359 | 95% | 174.93 | 272 / 286 |
lung | 94% | 1734.27 | 542 / 578 | 89% | 206.35 | 1032 / 1155 |
intestine | 57% | 4131.36 | 553 / 966 | 98% | 170.05 | 519 / 527 |
skin | 92% | 2663.20 | 1663 / 1809 | 59% | 51.34 | 277 / 472 |
esophagus | 50% | 8692.81 | 725 / 1445 | 99% | 315.05 | 181 / 183 |
thymus | 90% | 1642.21 | 590 / 653 | 53% | 54.30 | 319 / 605 |
bladder | 52% | 640.05 | 11 / 21 | 85% | 133.19 | 427 / 504 |
ovary | 36% | 483.57 | 65 / 180 | 97% | 154.23 | 415 / 430 |
adrenal gland | 100% | 10298.71 | 258 / 258 | 22% | 23.77 | 51 / 230 |
uterus | 31% | 657.80 | 53 / 170 | 90% | 291.48 | 411 / 459 |
spleen | 100% | 4645.99 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 357.88 | 45 / 45 |
peripheral blood | 100% | 8098.20 | 927 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 93% | 96.63 | 27 / 29 |
adipose | 83% | 1508.97 | 1005 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 70% | 59.94 | 56 / 80 |
blood vessel | 44% | 592.23 | 591 / 1335 | 0% | 0 | 0 / 0 |
heart | 33% | 504.13 | 280 / 861 | 0% | 0 | 0 / 0 |
muscle | 1% | 22.69 | 12 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0045198 | Biological process | establishment of epithelial cell apical/basal polarity |
GO_0072659 | Biological process | protein localization to plasma membrane |
GO_1903402 | Biological process | regulation of renal phosphate excretion |
GO_0097291 | Biological process | renal phosphate ion absorption |
GO_0060088 | Biological process | auditory receptor cell stereocilium organization |
GO_0060158 | Biological process | phospholipase C-activating dopamine receptor signaling pathway |
GO_0090090 | Biological process | negative regulation of canonical Wnt signaling pathway |
GO_0030036 | Biological process | actin cytoskeleton organization |
GO_0070293 | Biological process | renal absorption |
GO_0090660 | Biological process | cerebrospinal fluid circulation |
GO_0003096 | Biological process | renal sodium ion transport |
GO_0007009 | Biological process | plasma membrane organization |
GO_0010766 | Biological process | negative regulation of sodium ion transport |
GO_0008285 | Biological process | negative regulation of cell population proliferation |
GO_0045859 | Biological process | regulation of protein kinase activity |
GO_0007191 | Biological process | adenylate cyclase-activating dopamine receptor signaling pathway |
GO_0010761 | Biological process | fibroblast migration |
GO_0051683 | Biological process | establishment of Golgi localization |
GO_2001244 | Biological process | positive regulation of intrinsic apoptotic signaling pathway |
GO_0030033 | Biological process | microvillus assembly |
GO_0044782 | Biological process | cilium organization |
GO_0022612 | Biological process | gland morphogenesis |
GO_0045930 | Biological process | negative regulation of mitotic cell cycle |
GO_0032782 | Biological process | bile acid secretion |
GO_0010642 | Biological process | negative regulation of platelet-derived growth factor receptor signaling pathway |
GO_0007605 | Biological process | sensory perception of sound |
GO_0045199 | Biological process | maintenance of epithelial cell apical/basal polarity |
GO_0002009 | Biological process | morphogenesis of an epithelium |
GO_0070373 | Biological process | negative regulation of ERK1 and ERK2 cascade |
GO_0007097 | Biological process | nuclear migration |
GO_0016055 | Biological process | Wnt signaling pathway |
GO_0051939 | Biological process | gamma-aminobutyric acid import |
GO_0034635 | Biological process | glutathione transport |
GO_0030643 | Biological process | intracellular phosphate ion homeostasis |
GO_0150104 | Biological process | transport across blood-brain barrier |
GO_0098739 | Biological process | import across plasma membrane |
GO_0034767 | Biological process | positive regulation of monoatomic ion transmembrane transport |
GO_0010764 | Biological process | negative regulation of fibroblast migration |
GO_0065003 | Biological process | protein-containing complex assembly |
GO_0051898 | Biological process | negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction |
GO_0008360 | Biological process | regulation of cell shape |
GO_0008361 | Biological process | regulation of cell size |
GO_0012505 | Cellular component | endomembrane system |
GO_0071944 | Cellular component | cell periphery |
GO_0005634 | Cellular component | nucleus |
GO_0001726 | Cellular component | ruffle |
GO_0070062 | Cellular component | extracellular exosome |
GO_0030175 | Cellular component | filopodium |
GO_0015629 | Cellular component | actin cytoskeleton |
GO_0032426 | Cellular component | stereocilium tip |
GO_0097225 | Cellular component | sperm midpiece |
GO_0005902 | Cellular component | microvillus |
GO_0016020 | Cellular component | membrane |
GO_0031528 | Cellular component | microvillus membrane |
GO_0098797 | Cellular component | plasma membrane protein complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0031526 | Cellular component | brush border membrane |
GO_0016324 | Cellular component | apical plasma membrane |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0031982 | Cellular component | vesicle |
GO_0042802 | Molecular function | identical protein binding |
GO_0043495 | Molecular function | protein-membrane adaptor activity |
GO_0005102 | Molecular function | signaling receptor binding |
GO_0017081 | Molecular function | chloride channel regulator activity |
GO_0070851 | Molecular function | growth factor receptor binding |
GO_0019902 | Molecular function | phosphatase binding |
GO_0099103 | Molecular function | channel activator activity |
GO_0031800 | Molecular function | type 3 metabotropic glutamate receptor binding |
GO_0015185 | Molecular function | gamma-aminobutyric acid transmembrane transporter activity |
GO_0050780 | Molecular function | dopamine receptor binding |
GO_0045159 | Molecular function | myosin II binding |
GO_0030165 | Molecular function | PDZ domain binding |
GO_0031698 | Molecular function | beta-2 adrenergic receptor binding |
GO_0044325 | Molecular function | transmembrane transporter binding |
GO_0031799 | Molecular function | type 2 metabotropic glutamate receptor binding |
GO_0005515 | Molecular function | protein binding |
GO_0044877 | Molecular function | protein-containing complex binding |
GO_0008013 | Molecular function | beta-catenin binding |
Gene name | NHERF1 |
Protein name | NHERF family PDZ scaffold protein 1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 (Ezrin-radixin-moesin-binding phosphoprotein 50) (Regulatory cofactor of Na(+)/H(+) exchanger) (Sodium-hydrogen exchanger regulatory factor 1) (Solute carrier family 9 isoform A3 regulatory factor 1) Na(+)/H(+) exchange regulatory cofactor NHE-RF1 (NHERF-1) (Ezrin-radixin-moesin-binding phosphoprotein 50) (EBP50) (Regulatory cofactor of Na(+)/H(+) exchanger) (Sodium-hydrogen exchanger regulatory factor 1) (Solute carrier family 9 isoform A3 regulatory factor 1) |
Synonyms | SLC9A3R1 NHERF |
Description | FUNCTION: Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression. Necessary for recycling of internalized ADRB2. Was first known to play a role in the regulation of the activity and subcellular location of SLC9A3. Necessary for cAMP-mediated phosphorylation and inhibition of SLC9A3. May enhance Wnt signaling. May participate in HTR4 targeting to microvilli (By similarity). Involved in the regulation of phosphate reabsorption in the renal proximal tubules. Involved in sperm capacitation. May participate in the regulation of the chloride and bicarbonate homeostasis in spermatozoa. . |
Accessions | J3QRA3 ENST00000581356.1 ENST00000413388.2 [O14745-2] ENST00000583369.5 ENST00000262613.10 [O14745-1] O14745 J3QRP6 |