Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 14 studies | 29% ± 8% | |
lung | 12 studies | 34% ± 13% | |
kidney | 8 studies | 27% ± 5% | |
intestine | 8 studies | 29% ± 11% | |
bone marrow | 5 studies | 21% ± 4% | |
liver | 5 studies | 31% ± 17% | |
lymph node | 4 studies | 24% ± 2% | |
breast | 4 studies | 19% ± 3% | |
placenta | 3 studies | 36% ± 8% | |
eye | 3 studies | 25% ± 8% | |
uterus | 3 studies | 34% ± 18% | |
thymus | 3 studies | 34% ± 15% | |
brain | 3 studies | 24% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 1675.26 | 258 / 258 | 100% | 30.54 | 230 / 230 |
esophagus | 100% | 1711.23 | 1445 / 1445 | 100% | 28.48 | 183 / 183 |
intestine | 100% | 1543.57 | 966 / 966 | 100% | 48.79 | 527 / 527 |
liver | 100% | 1211.30 | 226 / 226 | 100% | 37.02 | 406 / 406 |
ovary | 100% | 1050.11 | 180 / 180 | 100% | 47.83 | 430 / 430 |
pancreas | 100% | 1011.40 | 328 / 328 | 100% | 44.38 | 178 / 178 |
skin | 100% | 1906.09 | 1809 / 1809 | 100% | 46.31 | 472 / 472 |
stomach | 100% | 1520.57 | 359 / 359 | 100% | 41.01 | 286 / 286 |
thymus | 100% | 1664.22 | 653 / 653 | 100% | 48.62 | 605 / 605 |
uterus | 100% | 1375.73 | 170 / 170 | 100% | 58.92 | 459 / 459 |
brain | 100% | 1445.67 | 2640 / 2642 | 100% | 42.99 | 705 / 705 |
bladder | 100% | 1562.67 | 21 / 21 | 100% | 50.89 | 503 / 504 |
kidney | 100% | 2028.39 | 89 / 89 | 100% | 31.74 | 899 / 901 |
lung | 100% | 1348.82 | 576 / 578 | 100% | 39.73 | 1155 / 1155 |
prostate | 100% | 1649.43 | 245 / 245 | 99% | 40.03 | 499 / 502 |
breast | 100% | 1265.24 | 459 / 459 | 99% | 35.66 | 1109 / 1118 |
eye | 0% | 0 | 0 / 0 | 100% | 43.46 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 98.35 | 29 / 29 |
spleen | 100% | 1739.16 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 52.67 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 30.73 | 1 / 1 |
adipose | 100% | 1159.30 | 1203 / 1204 | 0% | 0 | 0 / 0 |
heart | 100% | 1675.34 | 859 / 861 | 0% | 0 | 0 / 0 |
muscle | 100% | 1421.82 | 801 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1362.92 | 1330 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 95% | 1141.26 | 878 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006412 | Biological process | translation |
GO_0032543 | Biological process | mitochondrial translation |
GO_0005762 | Cellular component | mitochondrial large ribosomal subunit |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0005739 | Cellular component | mitochondrion |
GO_0003735 | Molecular function | structural constituent of ribosome |
Gene name | MRPL52 |
Protein name | Large ribosomal subunit protein mL52 (39S ribosomal protein L52, mitochondrial) Mitochondrial ribosomal protein L52 Large ribosomal subunit protein mL52 (39S ribosomal protein L52, mitochondrial) (L52mt) (MRP-L52) |
Synonyms | |
Description | |
Accessions | ENST00000556840.5 [Q86TS9-2] ENST00000555536.1 G3V4J1 Q86TS9 ENST00000397496.7 [Q86TS9-3] ENST00000355151.9 [Q86TS9-1] ENST00000555345.5 [Q86TS9-2] ENST00000557221.1 ENST00000432849.7 ENST00000553711.5 [Q86TS9-2] ENST00000397505.2 [Q86TS9-4] G3V4H9 ENST00000556465.5 G3V3U6 G5E9P5 |