Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 17 studies | 29% ± 8% | |
lung | 15 studies | 27% ± 11% | |
intestine | 8 studies | 24% ± 6% | |
lymph node | 5 studies | 24% ± 6% | |
brain | 5 studies | 30% ± 9% | |
liver | 5 studies | 19% ± 4% | |
pancreas | 4 studies | 38% ± 14% | |
kidney | 4 studies | 32% ± 4% | |
eye | 4 studies | 28% ± 14% | |
uterus | 4 studies | 28% ± 7% | |
breast | 4 studies | 19% ± 3% | |
adrenal gland | 3 studies | 28% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 9152.43 | 245 / 245 | 100% | 537.10 | 502 / 502 |
breast | 100% | 3051.42 | 459 / 459 | 100% | 76.05 | 1114 / 1118 |
thymus | 100% | 4572.01 | 653 / 653 | 99% | 82.31 | 601 / 605 |
intestine | 100% | 3518.26 | 965 / 966 | 98% | 53.10 | 519 / 527 |
kidney | 100% | 3122.04 | 89 / 89 | 98% | 88.74 | 884 / 901 |
brain | 98% | 2120.03 | 2597 / 2642 | 100% | 54.89 | 703 / 705 |
skin | 99% | 2277.84 | 1797 / 1809 | 98% | 56.51 | 463 / 472 |
liver | 99% | 2871.69 | 224 / 226 | 98% | 76.85 | 399 / 406 |
lung | 99% | 3029.41 | 573 / 578 | 98% | 53.18 | 1133 / 1155 |
pancreas | 99% | 1762.54 | 324 / 328 | 98% | 63.93 | 175 / 178 |
esophagus | 100% | 2148.84 | 1440 / 1445 | 97% | 33.46 | 178 / 183 |
adrenal gland | 100% | 5372.47 | 258 / 258 | 97% | 83.02 | 222 / 230 |
bladder | 100% | 2464.86 | 21 / 21 | 96% | 47.22 | 483 / 504 |
stomach | 100% | 4235.74 | 359 / 359 | 95% | 40.72 | 272 / 286 |
uterus | 100% | 2799.96 | 170 / 170 | 95% | 37.47 | 435 / 459 |
ovary | 100% | 2823.72 | 180 / 180 | 65% | 14.79 | 281 / 430 |
adipose | 100% | 3065.58 | 1204 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 19507.35 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2338.48 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3725.11 | 1334 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 100% | 7528.49 | 927 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 71.37 | 79 / 80 |
tonsil | 0% | 0 | 0 / 0 | 98% | 32.09 | 44 / 45 |
lymph node | 0% | 0 | 0 / 0 | 97% | 33.90 | 28 / 29 |
heart | 92% | 1611.19 | 796 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0042572 | Biological process | retinol metabolic process |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0004090 | Molecular function | carbonyl reductase (NADPH) activity |
GO_0005515 | Molecular function | protein binding |
GO_0016616 | Molecular function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
GO_0052650 | Molecular function | all-trans-retinol dehydrogenase (NADP+) activity |
Gene name | DHRS7 |
Protein name | Dehydrogenase/reductase 7 Dehydrogenase/reductase SDR family member 7 (EC 1.1.1.-) (Retinal short-chain dehydrogenase/reductase 4) (retSDR4) (Short chain dehydrogenase/reductase family 34C member 1) (Protein SDR34C1) |
Synonyms | CGI-86 RETSDR4 DHRS7A SDR34C1 UNQ285/PRO3448 |
Description | FUNCTION: NADPH-dependent oxidoreductase which catalyzes the reduction of a variety of compounds bearing carbonyl groups including steroids, retinoids and xenobiotics . Catalyzes the reduction/inactivation of 5alpha-dihydrotestosterone to 3alpha-androstanediol, with a possible role in the modulation of androgen receptor function . Involved in the reduction of all-trans-retinal to all-trans-retinol . Converts cortisone to 20beta-dihydrocortisone in vitro, although the physiological relevance of this activity is questionable . Reduces exogenous compounds such as quinones (1,2-naphtoquinone, 9,10-phenantrenequinone and benzoquinone) and other xenobiotics (alpha-diketones) in vitro, suggesting a role in the biotransformation of xenobiotics with carbonyl group . A dehydrogenase activity has not been detected so far . May play a role as tumor suppressor . . |
Accessions | ENST00000557137.1 ENST00000554101.5 ENST00000557185.6 [Q9Y394-1] H0YJ66 ENST00000557326.1 H0YJR8 G3V5J0 H0YJE4 Q9Y394 ENST00000557751.5 ENST00000536410.6 [Q9Y394-2] ENST00000216500.9 [Q9Y394-1] |