Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 46 studies | 56% ± 26% | |
pericyte | 38 studies | 61% ± 25% | |
fibroblast | 32 studies | 40% ± 17% | |
smooth muscle cell | 32 studies | 60% ± 24% | |
endothelial cell of lymphatic vessel | 24 studies | 70% ± 16% | |
capillary endothelial cell | 18 studies | 64% ± 26% | |
endothelial cell of artery | 16 studies | 73% ± 25% | |
vein endothelial cell | 15 studies | 65% ± 22% | |
endothelial cell of vascular tree | 15 studies | 65% ± 24% | |
basal cell | 14 studies | 40% ± 21% | |
myofibroblast cell | 13 studies | 62% ± 21% | |
type I pneumocyte | 12 studies | 81% ± 18% | |
connective tissue cell | 12 studies | 38% ± 22% | |
mesothelial cell | 12 studies | 55% ± 21% | |
adipocyte | 9 studies | 43% ± 18% | |
type II pneumocyte | 7 studies | 25% ± 10% | |
cardiac muscle cell | 6 studies | 26% ± 8% | |
epithelial cell | 6 studies | 32% ± 18% | |
secretory cell | 6 studies | 33% ± 14% | |
plasma cell | 5 studies | 26% ± 7% | |
melanocyte | 5 studies | 54% ± 17% | |
astrocyte | 4 studies | 28% ± 11% | |
adventitial cell | 4 studies | 31% ± 10% | |
ciliated cell | 4 studies | 21% ± 5% | |
Mueller cell | 4 studies | 39% ± 13% | |
club cell | 4 studies | 35% ± 23% | |
keratinocyte | 4 studies | 50% ± 12% | |
abnormal cell | 3 studies | 48% ± 31% | |
extravillous trophoblast | 3 studies | 51% ± 14% | |
myoepithelial cell | 3 studies | 59% ± 3% | |
muscle cell | 3 studies | 51% ± 21% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 14 studies | 30% ± 19% | |
heart | 6 studies | 22% ± 5% | |
uterus | 5 studies | 32% ± 6% | |
skin | 4 studies | 41% ± 14% | |
breast | 4 studies | 28% ± 7% | |
intestine | 3 studies | 20% ± 4% | |
placenta | 3 studies | 37% ± 12% | |
prostate | 3 studies | 32% ± 7% | |
adipose | 3 studies | 44% ± 24% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
skin | 98% | 32773.46 | 1780 / 1809 | 98% | 230.63 | 462 / 472 |
thymus | 99% | 21561.32 | 644 / 653 | 94% | 257.93 | 566 / 605 |
lung | 100% | 33351.20 | 577 / 578 | 86% | 119.77 | 993 / 1155 |
breast | 100% | 33816.15 | 458 / 459 | 84% | 71.05 | 939 / 1118 |
uterus | 97% | 21594.40 | 165 / 170 | 76% | 115.27 | 347 / 459 |
bladder | 100% | 23287.29 | 21 / 21 | 66% | 111.88 | 333 / 504 |
esophagus | 80% | 20067.35 | 1162 / 1445 | 81% | 150.69 | 149 / 183 |
prostate | 69% | 8128.89 | 169 / 245 | 77% | 54.55 | 386 / 502 |
intestine | 84% | 22077.09 | 808 / 966 | 55% | 37.02 | 288 / 527 |
ovary | 83% | 9139.06 | 150 / 180 | 44% | 26.32 | 190 / 430 |
stomach | 49% | 11559.69 | 176 / 359 | 62% | 42.79 | 178 / 286 |
adipose | 100% | 43889.69 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 27817.87 | 1335 / 1335 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 35.90 | 1 / 1 |
heart | 99% | 16584.17 | 849 / 861 | 0% | 0 | 0 / 0 |
spleen | 94% | 10369.15 | 226 / 241 | 0% | 0 | 0 / 0 |
pancreas | 0% | 17.45 | 1 / 328 | 88% | 98.00 | 156 / 178 |
eye | 0% | 0 | 0 / 0 | 88% | 67.59 | 70 / 80 |
kidney | 2% | 131.33 | 2 / 89 | 79% | 157.51 | 712 / 901 |
tonsil | 0% | 0 | 0 / 0 | 71% | 111.15 | 32 / 45 |
brain | 0% | 29.56 | 13 / 2642 | 45% | 48.85 | 318 / 705 |
muscle | 44% | 3012.62 | 355 / 803 | 0% | 0 | 0 / 0 |
adrenal gland | 2% | 88.02 | 4 / 258 | 39% | 26.02 | 89 / 230 |
liver | 0% | 0 | 0 / 226 | 37% | 23.07 | 151 / 406 |
lymph node | 0% | 0 | 0 / 0 | 34% | 16.31 | 10 / 29 |
peripheral blood | 0% | 11.46 | 2 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0051480 | Biological process | regulation of cytosolic calcium ion concentration |
GO_0031623 | Biological process | receptor internalization |
GO_0071560 | Biological process | cellular response to transforming growth factor beta stimulus |
GO_0046716 | Biological process | muscle cell cellular homeostasis |
GO_0048147 | Biological process | negative regulation of fibroblast proliferation |
GO_0046426 | Biological process | negative regulation of receptor signaling pathway via JAK-STAT |
GO_0098909 | Biological process | regulation of cardiac muscle cell action potential involved in regulation of contraction |
GO_0003057 | Biological process | regulation of the force of heart contraction by chemical signal |
GO_0006874 | Biological process | intracellular calcium ion homeostasis |
GO_0010608 | Biological process | post-transcriptional regulation of gene expression |
GO_0090090 | Biological process | negative regulation of canonical Wnt signaling pathway |
GO_0043085 | Biological process | positive regulation of catalytic activity |
GO_0048550 | Biological process | negative regulation of pinocytosis |
GO_0030857 | Biological process | negative regulation of epithelial cell differentiation |
GO_0033484 | Biological process | intracellular nitric oxide homeostasis |
GO_0016050 | Biological process | vesicle organization |
GO_0001666 | Biological process | response to hypoxia |
GO_0120162 | Biological process | positive regulation of cold-induced thermogenesis |
GO_0061099 | Biological process | negative regulation of protein tyrosine kinase activity |
GO_0033137 | Biological process | negative regulation of peptidyl-serine phosphorylation |
GO_0098903 | Biological process | regulation of membrane repolarization during action potential |
GO_1904294 | Biological process | positive regulation of ERAD pathway |
GO_0042310 | Biological process | vasoconstriction |
GO_0052547 | Biological process | regulation of peptidase activity |
GO_0006816 | Biological process | calcium ion transport |
GO_0051592 | Biological process | response to calcium ion |
GO_1900027 | Biological process | regulation of ruffle assembly |
GO_0030879 | Biological process | mammary gland development |
GO_0001525 | Biological process | angiogenesis |
GO_0097190 | Biological process | apoptotic signaling pathway |
GO_0007519 | Biological process | skeletal muscle tissue development |
GO_0002931 | Biological process | response to ischemia |
GO_0000165 | Biological process | MAPK cascade |
GO_0072584 | Biological process | caveolin-mediated endocytosis |
GO_0009617 | Biological process | response to bacterium |
GO_0031295 | Biological process | T cell costimulation |
GO_0010628 | Biological process | positive regulation of gene expression |
GO_2001244 | Biological process | positive regulation of intrinsic apoptotic signaling pathway |
GO_0019217 | Biological process | regulation of fatty acid metabolic process |
GO_2000811 | Biological process | negative regulation of anoikis |
GO_0060056 | Biological process | mammary gland involution |
GO_1903598 | Biological process | positive regulation of gap junction assembly |
GO_0071711 | Biological process | basement membrane organization |
GO_0001937 | Biological process | negative regulation of endothelial cell proliferation |
GO_0019915 | Biological process | lipid storage |
GO_0006809 | Biological process | nitric oxide biosynthetic process |
GO_0071375 | Biological process | cellular response to peptide hormone stimulus |
GO_0048144 | Biological process | fibroblast proliferation |
GO_0086091 | Biological process | regulation of heart rate by cardiac conduction |
GO_0031398 | Biological process | positive regulation of protein ubiquitination |
GO_1901844 | Biological process | regulation of cell communication by electrical coupling involved in cardiac conduction |
GO_0001960 | Biological process | negative regulation of cytokine-mediated signaling pathway |
GO_0034141 | Biological process | positive regulation of toll-like receptor 3 signaling pathway |
GO_0042532 | Biological process | negative regulation of tyrosine phosphorylation of STAT protein |
GO_0060355 | Biological process | positive regulation of cell adhesion molecule production |
GO_2001238 | Biological process | positive regulation of extrinsic apoptotic signaling pathway |
GO_0051899 | Biological process | membrane depolarization |
GO_1903361 | Biological process | protein localization to basolateral plasma membrane |
GO_0033138 | Biological process | positive regulation of peptidyl-serine phosphorylation |
GO_0045907 | Biological process | positive regulation of vasoconstriction |
GO_0001570 | Biological process | vasculogenesis |
GO_0006641 | Biological process | triglyceride metabolic process |
GO_0098911 | Biological process | regulation of ventricular cardiac muscle cell action potential |
GO_0071360 | Biological process | cellular response to exogenous dsRNA |
GO_0038016 | Biological process | insulin receptor internalization |
GO_0032570 | Biological process | response to progesterone |
GO_0030301 | Biological process | cholesterol transport |
GO_0055074 | Biological process | calcium ion homeostasis |
GO_0019221 | Biological process | cytokine-mediated signaling pathway |
GO_0043627 | Biological process | response to estrogen |
GO_0010524 | Biological process | positive regulation of calcium ion transport into cytosol |
GO_1901380 | Biological process | negative regulation of potassium ion transmembrane transport |
GO_0006940 | Biological process | regulation of smooth muscle contraction |
GO_0071218 | Biological process | cellular response to misfolded protein |
GO_1900085 | Biological process | negative regulation of peptidyl-tyrosine autophosphorylation |
GO_0045019 | Biological process | negative regulation of nitric oxide biosynthetic process |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0051649 | Biological process | establishment of localization in cell |
GO_0060070 | Biological process | canonical Wnt signaling pathway |
GO_0070836 | Biological process | caveola assembly |
GO_0030193 | Biological process | regulation of blood coagulation |
GO_0044860 | Biological process | protein localization to plasma membrane raft |
GO_0060546 | Biological process | negative regulation of necroptotic process |
GO_0030335 | Biological process | positive regulation of cell migration |
GO_0038166 | Biological process | angiotensin-activated signaling pathway |
GO_0043123 | Biological process | positive regulation of canonical NF-kappaB signal transduction |
GO_0030154 | Biological process | cell differentiation |
GO_0002067 | Biological process | glandular epithelial cell differentiation |
GO_0001935 | Biological process | endothelial cell proliferation |
GO_0019065 | Biological process | receptor-mediated endocytosis of virus by host cell |
GO_0010875 | Biological process | positive regulation of cholesterol efflux |
GO_0043409 | Biological process | negative regulation of MAPK cascade |
GO_0071455 | Biological process | cellular response to hyperoxia |
GO_1903609 | Biological process | negative regulation of inward rectifier potassium channel activity |
GO_0015031 | Biological process | protein transport |
GO_0008104 | Biological process | protein localization |
GO_0007595 | Biological process | lactation |
GO_2000535 | Biological process | regulation of entry of bacterium into host cell |
GO_0032507 | Biological process | maintenance of protein location in cell |
GO_0042632 | Biological process | cholesterol homeostasis |
GO_0031397 | Biological process | negative regulation of protein ubiquitination |
GO_0045121 | Cellular component | membrane raft |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0005768 | Cellular component | endosome |
GO_0031901 | Cellular component | early endosome membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0005811 | Cellular component | lipid droplet |
GO_0031410 | Cellular component | cytoplasmic vesicle |
GO_0016020 | Cellular component | membrane |
GO_0030666 | Cellular component | endocytic vesicle membrane |
GO_0032991 | Cellular component | protein-containing complex |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005929 | Cellular component | cilium |
GO_0002095 | Cellular component | caveolar macromolecular signaling complex |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005901 | Cellular component | caveola |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0002080 | Cellular component | acrosomal membrane |
GO_0042383 | Cellular component | sarcolemma |
GO_0005925 | Cellular component | focal adhesion |
GO_0005938 | Cellular component | cell cortex |
GO_0015485 | Molecular function | cholesterol binding |
GO_0050998 | Molecular function | nitric-oxide synthase binding |
GO_0042802 | Molecular function | identical protein binding |
GO_0051117 | Molecular function | ATPase binding |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0140311 | Molecular function | protein sequestering activity |
GO_0060090 | Molecular function | molecular adaptor activity |
GO_0005102 | Molecular function | signaling receptor binding |
GO_0005113 | Molecular function | patched binding |
GO_0019899 | Molecular function | enzyme binding |
GO_0030674 | Molecular function | protein-macromolecule adaptor activity |
GO_0030292 | Molecular function | protein tyrosine kinase inhibitor activity |
GO_0008142 | Molecular function | oxysterol binding |
GO_0044325 | Molecular function | transmembrane transporter binding |
GO_0070320 | Molecular function | inward rectifier potassium channel inhibitor activity |
GO_0005515 | Molecular function | protein binding |
GO_0044877 | Molecular function | protein-containing complex binding |
GO_0019901 | Molecular function | protein kinase binding |
GO_0016504 | Molecular function | peptidase activator activity |
GO_0031267 | Molecular function | small GTPase binding |
Gene name | CAV1 |
Protein name | Caveolin-1 Alternative protein CAV1 Caveolin 1 Caveolin |
Synonyms | tcag7.24 hCG_39088 CAV |
Description | FUNCTION: May act as a scaffolding protein within caveolar membranes . Forms a stable heterooligomeric complex with CAV2 that targets to lipid rafts and drives caveolae formation. Mediates the recruitment of CAVIN proteins (CAVIN1/2/3/4) to the caveolae . Interacts directly with G-protein alpha subunits and can functionally regulate their activity (By similarity). Involved in the costimulatory signal essential for T-cell receptor (TCR)-mediated T-cell activation. Its binding to DPP4 induces T-cell proliferation and NF-kappa-B activation in a T-cell receptor/CD3-dependent manner . Recruits CTNNB1 to caveolar membranes and may regulate CTNNB1-mediated signaling through the Wnt pathway (By similarity). Negatively regulates TGFB1-mediated activation of SMAD2/3 by mediating the internalization of TGFBR1 from membrane rafts leading to its subsequent degradation . Binds 20(S)-hydroxycholesterol (20(S)-OHC) (By similarity). . FUNCTION: May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity. . FUNCTION: May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity. . FUNCTION: May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity. . |
Accessions | ENST00000341049.7 [Q03135-1] C9JKI3 ENST00000393468.1 [Q03135-2] Q03135 Q2TNI1 ENST00000393470.1 A0A7P0YWJ6 ENST00000451122.5 L8EC89 ENST00000405348.6 [Q03135-2] ENST00000393467.1 [Q03135-2] E9PCT5 ENST00000456473.5 ENST00000614113.5 F8WDM7 |