TXNL1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
fibroblast	29 studies	27% ± 10%	Explore
endothelial cell	26 studies	28% ± 9%	Explore
B cell	24 studies	23% ± 7%	Explore
natural killer cell	23 studies	23% ± 6%	Explore
pericyte	22 studies	27% ± 11%	Explore
CD4-positive, alpha-beta T cell	19 studies	24% ± 8%	Explore
regulatory T cell	19 studies	23% ± 5%	Explore
macrophage	18 studies	22% ± 8%	Explore
smooth muscle cell	17 studies	28% ± 8%	Explore
conventional dendritic cell	17 studies	26% ± 14%	Explore
T cell	16 studies	22% ± 8%	Explore
memory B cell	16 studies	20% ± 4%	Explore
basal cell	16 studies	30% ± 15%	Explore
CD8-positive, alpha-beta T cell	16 studies	24% ± 7%	Explore
naive B cell	15 studies	21% ± 6%	Explore
epithelial cell	13 studies	39% ± 20%	Explore
plasma cell	12 studies	31% ± 11%	Explore
connective tissue cell	12 studies	35% ± 11%	Explore
endothelial cell of vascular tree	12 studies	21% ± 5%	Explore
myofibroblast cell	11 studies	35% ± 12%	Explore
gamma-delta T cell	11 studies	26% ± 16%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	10 studies	21% ± 5%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	10 studies	23% ± 7%	Explore
non-classical monocyte	10 studies	27% ± 11%	Explore
CD16-negative, CD56-bright natural killer cell, human	10 studies	24% ± 6%	Explore
ciliated cell	10 studies	33% ± 17%	Explore
endothelial cell of lymphatic vessel	9 studies	23% ± 6%	Explore
CD16-positive, CD56-dim natural killer cell, human	9 studies	23% ± 5%	Explore
classical monocyte	9 studies	25% ± 10%	Explore
mature NK T cell	9 studies	21% ± 3%	Explore
abnormal cell	9 studies	29% ± 9%	Explore
mucosal invariant T cell	9 studies	20% ± 3%	Explore
mast cell	8 studies	21% ± 3%	Explore
plasmablast	8 studies	37% ± 23%	Explore
CD4-positive, alpha-beta memory T cell	8 studies	23% ± 6%	Explore
secretory cell	8 studies	26% ± 16%	Explore
oligodendrocyte	8 studies	26% ± 8%	Explore
CD8-positive, alpha-beta memory T cell	7 studies	25% ± 10%	Explore
neuron	7 studies	42% ± 16%	Explore
glutamatergic neuron	7 studies	39% ± 23%	Explore
astrocyte	7 studies	27% ± 9%	Explore
GABAergic neuron	7 studies	33% ± 18%	Explore
plasmacytoid dendritic cell	7 studies	26% ± 9%	Explore
effector memory CD8-positive, alpha-beta T cell	6 studies	25% ± 5%	Explore
epithelial cell of proximal tubule	6 studies	21% ± 4%	Explore
endothelial cell of artery	6 studies	21% ± 6%	Explore
innate lymphoid cell	6 studies	22% ± 5%	Explore
myeloid cell	6 studies	26% ± 12%	Explore
capillary endothelial cell	6 studies	26% ± 10%	Explore
dendritic cell	6 studies	32% ± 23%	Explore
retinal rod cell	6 studies	27% ± 10%	Explore
monocyte	6 studies	21% ± 5%	Explore
effector CD8-positive, alpha-beta T cell	5 studies	25% ± 6%	Explore
progenitor cell	5 studies	32% ± 9%	Explore
mesothelial cell	5 studies	44% ± 17%	Explore
vein endothelial cell	5 studies	28% ± 9%	Explore
retinal ganglion cell	5 studies	49% ± 22%	Explore
erythroblast	5 studies	40% ± 21%	Explore
precursor B cell	5 studies	30% ± 11%	Explore
type I pneumocyte	5 studies	26% ± 9%	Explore
retinal cone cell	5 studies	43% ± 18%	Explore
cardiac muscle cell	5 studies	21% ± 1%	Explore
erythrocyte	5 studies	40% ± 20%	Explore
T follicular helper cell	5 studies	22% ± 3%	Explore
effector memory CD4-positive, alpha-beta T cell	5 studies	24% ± 7%	Explore
oligodendrocyte precursor cell	5 studies	30% ± 10%	Explore
goblet cell	5 studies	31% ± 12%	Explore
pancreatic A cell	4 studies	32% ± 10%	Explore
leukocyte	4 studies	26% ± 6%	Explore
exhausted T cell	4 studies	30% ± 10%	Explore
kidney loop of Henle epithelial cell	4 studies	22% ± 2%	Explore
enterocyte	4 studies	17% ± 3%	Explore
intestinal crypt stem cell	4 studies	23% ± 5%	Explore
hematopoietic stem cell	4 studies	28% ± 9%	Explore
club cell	4 studies	28% ± 9%	Explore
immature B cell	4 studies	22% ± 5%	Explore
amacrine cell	4 studies	31% ± 9%	Explore
retina horizontal cell	4 studies	30% ± 8%	Explore
alveolar macrophage	4 studies	18% ± 2%	Explore
Mueller cell	4 studies	20% ± 3%	Explore
effector CD4-positive, alpha-beta T cell	4 studies	30% ± 7%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	27% ± 6%	Explore
muscle cell	4 studies	27% ± 12%	Explore
interneuron	4 studies	41% ± 21%	Explore
hematopoietic precursor cell	3 studies	50% ± 10%	Explore
precursor cell	3 studies	40% ± 13%	Explore
type B pancreatic cell	3 studies	49% ± 4%	Explore
mononuclear phagocyte	3 studies	30% ± 13%	Explore
kidney distal convoluted tubule epithelial cell	3 studies	34% ± 9%	Explore
neural crest cell	3 studies	37% ± 6%	Explore
retinal bipolar neuron	3 studies	34% ± 11%	Explore
placental villous trophoblast	3 studies	48% ± 11%	Explore
lymphocyte	3 studies	29% ± 10%	Explore
pro-B cell	3 studies	30% ± 4%	Explore
type II pneumocyte	3 studies	33% ± 14%	Explore
serous secreting cell	3 studies	27% ± 6%	Explore
OFF-bipolar cell	3 studies	30% ± 4%	Explore
ON-bipolar cell	3 studies	31% ± 6%	Explore
rod bipolar cell	3 studies	28% ± 2%	Explore
germinal center B cell	3 studies	26% ± 3%	Explore
myoepithelial cell	3 studies	31% ± 4%	Explore
pancreatic ductal cell	3 studies	40% ± 13%	Explore
megakaryocyte-erythroid progenitor cell	3 studies	47% ± 25%	Explore
enteroendocrine cell	3 studies	34% ± 11%	Explore
group 3 innate lymphoid cell	3 studies	32% ± 15%	Explore
keratinocyte	3 studies	20% ± 3%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	3 studies	19% ± 5%	Explore
double negative thymocyte	3 studies	38% ± 19%	Explore
progenitor cell of mammary luminal epithelium	3 studies	23% ± 3%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	14 studies	23% ± 8%	Explore
lung	12 studies	31% ± 15%	Explore
eye	9 studies	26% ± 10%	Explore
brain	8 studies	34% ± 16%	Explore
kidney	7 studies	22% ± 5%	Explore
intestine	6 studies	31% ± 13%	Explore
liver	5 studies	32% ± 24%	Explore
lymph node	5 studies	26% ± 11%	Explore
placenta	4 studies	27% ± 10%	Explore
bone marrow	4 studies	20% ± 4%	Explore
uterus	4 studies	29% ± 15%	Explore
breast	4 studies	23% ± 3%	Explore
pancreas	3 studies	43% ± 2%	Explore
thymus	3 studies	40% ± 16%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	100%	3213.89	459 / 459	100%	27.03	1118 / 1118
esophagus	100%	3421.81	1445 / 1445	100%	14.45	183 / 183
ovary	100%	3556.17	180 / 180	100%	20.01	430 / 430
pancreas	100%	2706.93	328 / 328	100%	15.33	178 / 178
prostate	100%	3042.43	245 / 245	100%	23.66	502 / 502
thymus	100%	8589.07	653 / 653	100%	47.56	605 / 605
uterus	100%	3438.30	170 / 170	100%	22.84	459 / 459
brain	100%	4357.07	2641 / 2642	100%	28.43	705 / 705
liver	100%	2510.71	226 / 226	100%	17.14	405 / 406
kidney	100%	2992.44	89 / 89	100%	18.93	898 / 901
bladder	100%	3749.62	21 / 21	100%	19.93	502 / 504
adrenal gland	100%	4343.16	258 / 258	100%	22.15	229 / 230
lung	99%	2796.42	575 / 578	100%	20.01	1155 / 1155
stomach	100%	3054.11	359 / 359	99%	16.59	283 / 286
intestine	100%	3438.75	966 / 966	98%	16.87	519 / 527
skin	100%	3232.96	1807 / 1809	98%	18.73	463 / 472
adipose	100%	3308.06	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	27.09	29 / 29
muscle	100%	6224.65	803 / 803	0%	0	0 / 0
spleen	100%	2557.61	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	21.65	45 / 45
ureter	0%	0	0 / 0	100%	7.55	1 / 1
blood vessel	100%	3445.46	1334 / 1335	0%	0	0 / 0
heart	97%	3179.05	832 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	96%	15.25	77 / 80
peripheral blood	93%	2449.35	864 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0