Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 17 studies | 29% ± 14% | |
peripheral blood | 13 studies | 27% ± 9% | |
brain | 10 studies | 33% ± 16% | |
kidney | 6 studies | 19% ± 3% | |
intestine | 5 studies | 23% ± 7% | |
pancreas | 4 studies | 46% ± 17% | |
bone marrow | 4 studies | 20% ± 4% | |
eye | 4 studies | 24% ± 4% | |
heart | 4 studies | 19% ± 2% | |
uterus | 4 studies | 29% ± 11% | |
breast | 4 studies | 22% ± 4% | |
liver | 4 studies | 26% ± 8% | |
adipose | 4 studies | 34% ± 14% | |
placenta | 3 studies | 32% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 9830.55 | 459 / 459 | 100% | 66.36 | 1118 / 1118 |
esophagus | 100% | 7385.00 | 1445 / 1445 | 100% | 58.53 | 183 / 183 |
intestine | 100% | 7140.97 | 966 / 966 | 100% | 50.95 | 527 / 527 |
lung | 100% | 8488.80 | 578 / 578 | 100% | 55.56 | 1155 / 1155 |
uterus | 100% | 6325.15 | 170 / 170 | 100% | 57.85 | 459 / 459 |
bladder | 100% | 7015.62 | 21 / 21 | 100% | 55.10 | 503 / 504 |
ovary | 100% | 4243.96 | 180 / 180 | 100% | 32.65 | 429 / 430 |
brain | 100% | 4026.14 | 2629 / 2642 | 100% | 68.48 | 705 / 705 |
prostate | 100% | 5383.08 | 244 / 245 | 100% | 40.33 | 501 / 502 |
kidney | 100% | 4636.56 | 89 / 89 | 99% | 59.22 | 895 / 901 |
thymus | 100% | 5386.42 | 651 / 653 | 100% | 51.00 | 602 / 605 |
stomach | 99% | 4112.00 | 356 / 359 | 100% | 50.82 | 286 / 286 |
pancreas | 98% | 3583.76 | 323 / 328 | 100% | 65.19 | 178 / 178 |
skin | 100% | 7366.37 | 1809 / 1809 | 97% | 53.77 | 458 / 472 |
adrenal gland | 100% | 5295.00 | 258 / 258 | 97% | 32.61 | 223 / 230 |
liver | 89% | 2190.74 | 201 / 226 | 95% | 24.89 | 386 / 406 |
adipose | 100% | 12084.75 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 8488.73 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 37.10 | 29 / 29 |
muscle | 100% | 15798.21 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 6700.17 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 61.43 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 30.05 | 1 / 1 |
peripheral blood | 99% | 11638.55 | 917 / 929 | 0% | 0 | 0 / 0 |
heart | 98% | 6550.28 | 842 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 88% | 21.92 | 70 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0042149 | Biological process | cellular response to glucose starvation |
GO_2000786 | Biological process | positive regulation of autophagosome assembly |
GO_1903527 | Biological process | positive regulation of membrane tubulation |
GO_0061024 | Biological process | membrane organization |
GO_0090148 | Biological process | membrane fission |
GO_0031334 | Biological process | positive regulation of protein-containing complex assembly |
GO_0048102 | Biological process | autophagic cell death |
GO_0010508 | Biological process | positive regulation of autophagy |
GO_0034198 | Biological process | cellular response to amino acid starvation |
GO_1903778 | Biological process | protein localization to vacuolar membrane |
GO_0006915 | Biological process | apoptotic process |
GO_1903955 | Biological process | positive regulation of protein targeting to mitochondrion |
GO_0006914 | Biological process | autophagy |
GO_0016241 | Biological process | regulation of macroautophagy |
GO_0032801 | Biological process | receptor catabolic process |
GO_0031647 | Biological process | regulation of protein stability |
GO_0032465 | Biological process | regulation of cytokinesis |
GO_0030496 | Cellular component | midbody |
GO_0031410 | Cellular component | cytoplasmic vesicle |
GO_0016020 | Cellular component | membrane |
GO_0000421 | Cellular component | autophagosome membrane |
GO_0032991 | Cellular component | protein-containing complex |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0005741 | Cellular component | mitochondrial outer membrane |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0008289 | Molecular function | lipid binding |
GO_0045296 | Molecular function | cadherin binding |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
Gene name | SH3GLB1 |
Protein name | Endophilin-B1 (SH3 domain-containing GRB2-like protein B1) Endophilin-B1 (Bax-interacting factor 1) (Bif-1) (SH3 domain-containing GRB2-like protein B1) |
Synonyms | CGI-61 KIAA0491 hCG_25233 |
Description | FUNCTION: May be required for normal outer mitochondrial membrane dynamics . Required for coatomer-mediated retrograde transport in certain cells (By similarity). May recruit other proteins to membranes with high curvature. May promote membrane fusion . Involved in activation of caspase-dependent apoptosis by promoting BAX/BAK1 activation . Isoform 1 acts proapoptotic in fibroblasts (By similarity). Involved in caspase-independent apoptosis during nutrition starvation and involved in the regulation of autophagy. Activates lipid kinase activity of PIK3C3 during autophagy probably by associating with the PI3K complex II (PI3KC3-C2) . Associated with PI3KC3-C2 during autophagy may regulate the trafficking of ATG9A from the Golgi complex to the peripheral cytoplasm for the formation of autophagosomes by inducing Golgi membrane tubulation and fragmentation . Involved in regulation of degradative endocytic trafficking and cytokinesis, probably in the context of PI3KC3-C2 . Isoform 2 acts antiapoptotic in neuronal cells; involved in maintenance of mitochondrial morphology and promotes neuronal viability (By similarity). . |
Accessions | ENST00000705519.1 ENST00000616170.4 A0A994J549 ENST00000370558.8 [Q9Y371-1] Q9Y371 ENST00000535010.5 [Q9Y371-3] A0A140VJU5 ENST00000482504.1 [Q9Y371-2] A0A087WW40 |