RER1 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
fibroblast	30 studies	25% ± 11%	Explore
macrophage	29 studies	25% ± 10%	Explore
natural killer cell	24 studies	23% ± 7%	Explore
endothelial cell	23 studies	23% ± 10%	Explore
classical monocyte	19 studies	26% ± 11%	Explore
non-classical monocyte	18 studies	29% ± 14%	Explore
CD8-positive, alpha-beta T cell	18 studies	28% ± 11%	Explore
regulatory T cell	18 studies	26% ± 8%	Explore
pericyte	17 studies	21% ± 5%	Explore
ciliated cell	16 studies	36% ± 17%	Explore
CD4-positive, alpha-beta T cell	15 studies	28% ± 13%	Explore
B cell	14 studies	21% ± 6%	Explore
T cell	14 studies	22% ± 6%	Explore
monocyte	14 studies	23% ± 6%	Explore
conventional dendritic cell	14 studies	28% ± 14%	Explore
plasmacytoid dendritic cell	14 studies	28% ± 11%	Explore
epithelial cell	14 studies	42% ± 19%	Explore
gamma-delta T cell	14 studies	23% ± 9%	Explore
plasma cell	11 studies	41% ± 11%	Explore
basal cell	11 studies	36% ± 17%	Explore
mature NK T cell	11 studies	21% ± 5%	Explore
connective tissue cell	11 studies	26% ± 8%	Explore
smooth muscle cell	11 studies	22% ± 6%	Explore
endothelial cell of lymphatic vessel	10 studies	24% ± 7%	Explore
CD16-positive, CD56-dim natural killer cell, human	10 studies	24% ± 4%	Explore
CD8-positive, alpha-beta memory T cell	10 studies	24% ± 10%	Explore
CD16-negative, CD56-bright natural killer cell, human	9 studies	23% ± 3%	Explore
abnormal cell	9 studies	25% ± 9%	Explore
memory B cell	9 studies	19% ± 3%	Explore
mucosal invariant T cell	9 studies	20% ± 2%	Explore
mast cell	8 studies	19% ± 3%	Explore
type I pneumocyte	8 studies	23% ± 10%	Explore
plasmablast	8 studies	44% ± 25%	Explore
secretory cell	8 studies	29% ± 17%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	8 studies	23% ± 6%	Explore
CD4-positive, alpha-beta memory T cell	7 studies	29% ± 10%	Explore
goblet cell	7 studies	25% ± 10%	Explore
dendritic cell	7 studies	42% ± 25%	Explore
myofibroblast cell	7 studies	24% ± 6%	Explore
myeloid cell	7 studies	31% ± 12%	Explore
club cell	6 studies	29% ± 6%	Explore
respiratory goblet cell	6 studies	31% ± 19%	Explore
effector CD8-positive, alpha-beta T cell	6 studies	30% ± 11%	Explore
naive B cell	6 studies	19% ± 4%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	6 studies	18% ± 2%	Explore
enterocyte	6 studies	24% ± 6%	Explore
T follicular helper cell	6 studies	22% ± 5%	Explore
alveolar macrophage	5 studies	24% ± 2%	Explore
effector memory CD8-positive, alpha-beta T cell	5 studies	26% ± 3%	Explore
kidney loop of Henle epithelial cell	5 studies	25% ± 9%	Explore
vein endothelial cell	5 studies	17% ± 2%	Explore
transit amplifying cell	5 studies	29% ± 11%	Explore
type II pneumocyte	5 studies	25% ± 15%	Explore
squamous epithelial cell	4 studies	43% ± 20%	Explore
leukocyte	4 studies	25% ± 11%	Explore
mononuclear phagocyte	4 studies	30% ± 14%	Explore
exhausted T cell	4 studies	38% ± 8%	Explore
renal alpha-intercalated cell	4 studies	36% ± 4%	Explore
endothelial cell of artery	4 studies	20% ± 1%	Explore
capillary endothelial cell	4 studies	19% ± 1%	Explore
astrocyte	4 studies	24% ± 10%	Explore
adventitial cell	4 studies	23% ± 7%	Explore
effector CD4-positive, alpha-beta T cell	4 studies	35% ± 12%	Explore
endothelial cell of vascular tree	4 studies	20% ± 3%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	26% ± 4%	Explore
effector memory CD4-positive, alpha-beta T cell	4 studies	33% ± 13%	Explore
innate lymphoid cell	4 studies	19% ± 3%	Explore
T-helper 17 cell	4 studies	29% ± 16%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	4 studies	20% ± 3%	Explore
deuterosomal cell	3 studies	25% ± 10%	Explore
duct epithelial cell	3 studies	27% ± 12%	Explore
pancreatic A cell	3 studies	29% ± 6%	Explore
type B pancreatic cell	3 studies	28% ± 5%	Explore
hematopoietic precursor cell	3 studies	31% ± 8%	Explore
epithelial cell of proximal tubule	3 studies	18% ± 3%	Explore
IgG plasma cell	3 studies	21% ± 6%	Explore
extravillous trophoblast	3 studies	42% ± 16%	Explore
placental villous trophoblast	3 studies	56% ± 3%	Explore
lymphocyte	3 studies	29% ± 11%	Explore
intraepithelial lymphocyte	3 studies	25% ± 7%	Explore
erythroblast	3 studies	34% ± 22%	Explore
intermediate monocyte	3 studies	39% ± 16%	Explore
pancreatic ductal cell	3 studies	42% ± 11%	Explore
oligodendrocyte precursor cell	3 studies	23% ± 2%	Explore
enteroendocrine cell	3 studies	25% ± 8%	Explore
oligodendrocyte	3 studies	24% ± 4%	Explore
T-helper 1 cell	3 studies	30% ± 12%	Explore
double negative thymocyte	3 studies	25% ± 9%	Explore
hepatocyte	3 studies	46% ± 18%	Explore
microglial cell	3 studies	19% ± 3%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
lung	14 studies	29% ± 13%	Explore
peripheral blood	12 studies	26% ± 7%	Explore
intestine	7 studies	24% ± 10%	Explore
kidney	6 studies	22% ± 5%	Explore
liver	6 studies	28% ± 17%	Explore
brain	5 studies	28% ± 7%	Explore
uterus	4 studies	30% ± 17%	Explore
lymph node	4 studies	21% ± 9%	Explore
pancreas	3 studies	33% ± 2%	Explore
placenta	3 studies	43% ± 12%	Explore
bone marrow	3 studies	19% ± 2%	Explore
eye	3 studies	26% ± 4%	Explore
breast	3 studies	21% ± 4%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	5820.12	1445 / 1445	100%	40.82	183 / 183
intestine	100%	5663.98	966 / 966	100%	58.78	527 / 527
liver	100%	6889.19	226 / 226	100%	51.26	406 / 406
lung	100%	5031.47	578 / 578	100%	57.77	1155 / 1155
ovary	100%	5265.02	180 / 180	100%	54.18	430 / 430
pancreas	100%	4186.99	328 / 328	100%	58.13	178 / 178
prostate	100%	5403.79	245 / 245	100%	67.21	502 / 502
skin	100%	6950.44	1809 / 1809	100%	61.19	472 / 472
stomach	100%	4857.96	359 / 359	100%	51.70	286 / 286
uterus	100%	5021.15	170 / 170	100%	63.77	459 / 459
breast	100%	5238.35	459 / 459	100%	67.39	1117 / 1118
kidney	100%	5395.67	89 / 89	100%	45.67	900 / 901
thymus	100%	5708.89	653 / 653	100%	52.93	604 / 605
bladder	100%	4959.62	21 / 21	100%	65.00	503 / 504
brain	99%	2831.52	2618 / 2642	100%	41.82	705 / 705
adrenal gland	100%	8674.58	258 / 258	99%	39.32	227 / 230
adipose	100%	5290.52	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	53.09	29 / 29
spleen	100%	6834.83	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	53.29	45 / 45
ureter	0%	0	0 / 0	100%	49.13	1 / 1
blood vessel	100%	4604.61	1334 / 1335	0%	0	0 / 0
muscle	100%	3572.27	802 / 803	0%	0	0 / 0
heart	99%	3214.32	853 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	99%	38.68	79 / 80
peripheral blood	95%	3937.44	886 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_1903078	Biological process	positive regulation of protein localization to plasma membrane
GO_0071340	Biological process	skeletal muscle acetylcholine-gated channel clustering
GO_0006890	Biological process	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO_0006621	Biological process	protein retention in ER lumen
GO_0009986	Cellular component	cell surface
GO_0000139	Cellular component	Golgi membrane
GO_0005783	Cellular component	endoplasmic reticulum
GO_0005794	Cellular component	Golgi apparatus
GO_0005886	Cellular component	plasma membrane
GO_0005793	Cellular component	endoplasmic reticulum-Golgi intermediate compartment
GO_0033130	Molecular function	acetylcholine receptor binding
GO_0005515	Molecular function	protein binding
GO_0003674	Molecular function	molecular_function

IV. Literature review

[source]

Gene name	RER1
Protein name	Protein RER1
Synonyms	hCG_24604
Description	FUNCTION: Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. . FUNCTION: Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. . FUNCTION: Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. . FUNCTION: Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. . FUNCTION: Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. . FUNCTION: Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. . FUNCTION: Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. . FUNCTION: Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. .
Accessions	ENST00000605895.6 ENST00000443438.5 Q9P0H9 Q5T093 ENST00000378513.7 A0A0A0MR06 ENST00000378518.5 Q5T092 Q6IBJ7 Q5T094 O15258 ENST00000306256.13 Q5T091 ENST00000488353.2 ENST00000378512.5

RER1 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review