Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 14 studies | 43% ± 19% | |
intestine | 13 studies | 33% ± 18% | |
peripheral blood | 10 studies | 35% ± 12% | |
eye | 9 studies | 37% ± 17% | |
brain | 9 studies | 26% ± 10% | |
kidney | 8 studies | 38% ± 15% | |
liver | 6 studies | 38% ± 20% | |
pancreas | 5 studies | 60% ± 24% | |
placenta | 4 studies | 50% ± 24% | |
bone marrow | 4 studies | 30% ± 9% | |
uterus | 4 studies | 55% ± 15% | |
prostate | 4 studies | 25% ± 6% | |
breast | 4 studies | 35% ± 14% | |
thymus | 3 studies | 44% ± 16% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2712.16 | 1445 / 1445 | 100% | 21.64 | 183 / 183 |
liver | 100% | 3888.42 | 226 / 226 | 100% | 27.68 | 406 / 406 |
ovary | 100% | 2660.04 | 180 / 180 | 100% | 70.94 | 430 / 430 |
stomach | 100% | 2648.13 | 359 / 359 | 100% | 28.14 | 286 / 286 |
thymus | 100% | 5504.05 | 653 / 653 | 100% | 45.36 | 605 / 605 |
brain | 100% | 4709.71 | 2642 / 2642 | 100% | 48.54 | 704 / 705 |
prostate | 100% | 2585.63 | 245 / 245 | 100% | 37.39 | 501 / 502 |
pancreas | 100% | 1791.42 | 327 / 328 | 100% | 21.20 | 178 / 178 |
intestine | 100% | 3136.25 | 966 / 966 | 100% | 26.25 | 525 / 527 |
adrenal gland | 100% | 7446.30 | 258 / 258 | 100% | 40.08 | 229 / 230 |
breast | 100% | 3729.47 | 459 / 459 | 99% | 45.27 | 1111 / 1118 |
uterus | 100% | 3001.75 | 170 / 170 | 99% | 20.61 | 456 / 459 |
bladder | 100% | 2535.95 | 21 / 21 | 99% | 22.76 | 500 / 504 |
lung | 100% | 2664.83 | 576 / 578 | 99% | 17.97 | 1146 / 1155 |
kidney | 100% | 3553.55 | 89 / 89 | 99% | 18.99 | 890 / 901 |
skin | 100% | 3214.52 | 1808 / 1809 | 98% | 22.53 | 462 / 472 |
adipose | 100% | 3600.10 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 16.77 | 29 / 29 |
muscle | 100% | 5039.37 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2448.02 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 23.35 | 1 / 1 |
blood vessel | 100% | 3125.45 | 1332 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 21.34 | 79 / 80 |
heart | 98% | 3431.09 | 847 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 13.26 | 41 / 45 |
peripheral blood | 74% | 1555.87 | 690 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0009060 | Biological process | aerobic respiration |
GO_0006120 | Biological process | mitochondrial electron transport, NADH to ubiquinone |
GO_0042776 | Biological process | proton motive force-driven mitochondrial ATP synthesis |
GO_0055085 | Biological process | transmembrane transport |
GO_0032981 | Biological process | mitochondrial respiratory chain complex I assembly |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0035577 | Cellular component | azurophil granule membrane |
GO_0045271 | Cellular component | respiratory chain complex I |
GO_0005886 | Cellular component | plasma membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0005739 | Cellular component | mitochondrion |
GO_0008137 | Molecular function | NADH dehydrogenase (ubiquinone) activity |
GO_0005515 | Molecular function | protein binding |
Gene name | NDUFC2 |
Protein name | NADH:ubiquinone oxidoreductase subunit C2 NADH dehydrogenase [ubiquinone] 1 subunit C2 (Complex I-B14.5b) (CI-B14.5b) (Human lung cancer oncogene 1 protein) (HLC-1) (NADH-ubiquinone oxidoreductase subunit B14.5b) NADH dehydrogenase [ubiquinone] 1 subunit C2 |
Synonyms | HLC1 |
Description | FUNCTION: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis but required for the complex assembly. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. . FUNCTION: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. . |
Accessions | E9PM14 ENST00000527806.1 [O95298-3] ENST00000534029.5 ENST00000525085.1 [O95298-2] O95298 ENST00000528164.1 ENST00000281031.5 [O95298-1] E9PRJ5 |