Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 14 studies | 25% ± 8% | |
lung | 11 studies | 29% ± 15% | |
kidney | 5 studies | 21% ± 4% | |
intestine | 5 studies | 21% ± 6% | |
liver | 4 studies | 29% ± 21% | |
lymph node | 4 studies | 24% ± 9% | |
brain | 4 studies | 21% ± 4% | |
pancreas | 3 studies | 53% ± 3% | |
eye | 3 studies | 21% ± 7% | |
breast | 3 studies | 18% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1337.49 | 1445 / 1445 | 100% | 143.86 | 183 / 183 |
liver | 100% | 1196.49 | 226 / 226 | 100% | 44.05 | 406 / 406 |
ovary | 100% | 656.67 | 180 / 180 | 100% | 80.92 | 430 / 430 |
pancreas | 100% | 935.53 | 328 / 328 | 100% | 51.76 | 178 / 178 |
skin | 100% | 1237.03 | 1809 / 1809 | 100% | 45.79 | 472 / 472 |
thymus | 100% | 1544.29 | 653 / 653 | 100% | 55.48 | 605 / 605 |
uterus | 100% | 965.78 | 170 / 170 | 100% | 89.57 | 459 / 459 |
brain | 100% | 1866.87 | 2642 / 2642 | 100% | 46.50 | 704 / 705 |
intestine | 100% | 1401.72 | 966 / 966 | 100% | 109.86 | 526 / 527 |
bladder | 100% | 1216.71 | 21 / 21 | 100% | 87.66 | 503 / 504 |
kidney | 100% | 2007.38 | 89 / 89 | 100% | 43.17 | 898 / 901 |
prostate | 100% | 2082.13 | 245 / 245 | 100% | 80.11 | 500 / 502 |
adrenal gland | 100% | 1321.72 | 258 / 258 | 100% | 37.96 | 229 / 230 |
stomach | 100% | 1422.02 | 359 / 359 | 99% | 120.19 | 284 / 286 |
breast | 100% | 1204.63 | 459 / 459 | 99% | 115.32 | 1109 / 1118 |
lung | 100% | 1153.21 | 576 / 578 | 99% | 76.80 | 1148 / 1155 |
adipose | 100% | 1033.09 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 46.59 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 68.16 | 29 / 29 |
spleen | 100% | 1370.00 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 81.00 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 66.29 | 1 / 1 |
heart | 100% | 1255.44 | 859 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1099.02 | 1330 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 1218.59 | 919 / 929 | 0% | 0 | 0 / 0 |
muscle | 99% | 1004.28 | 794 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006915 | Biological process | apoptotic process |
GO_0051491 | Biological process | positive regulation of filopodium assembly |
GO_0043066 | Biological process | negative regulation of apoptotic process |
GO_0030335 | Biological process | positive regulation of cell migration |
GO_0009898 | Cellular component | cytoplasmic side of plasma membrane |
GO_0005829 | Cellular component | cytosol |
GO_0005886 | Cellular component | plasma membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | MIEN1 |
Protein name | Migration and invasion enhancer 1 (HBV X-transactivated gene 4 protein) (HBV XAg-transactivated protein 4) (Protein C35) Migration and invasion enhancer 1 |
Synonyms | RDX12 XTP4 C17orf37 |
Description | FUNCTION: Increases cell migration by inducing filopodia formation at the leading edge of migrating cells. Plays a role in regulation of apoptosis, possibly through control of CASP3. May be involved in a redox-related process. . |
Accessions | J3KTI2 ENST00000394231.8 ENST00000577810.1 Q9BRT3 |