Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 17 studies | 36% ± 14% | |
peripheral blood | 14 studies | 31% ± 10% | |
intestine | 11 studies | 26% ± 12% | |
brain | 9 studies | 24% ± 7% | |
kidney | 8 studies | 33% ± 7% | |
eye | 6 studies | 26% ± 11% | |
lymph node | 5 studies | 38% ± 12% | |
uterus | 4 studies | 40% ± 18% | |
breast | 4 studies | 26% ± 3% | |
liver | 4 studies | 35% ± 18% | |
pancreas | 3 studies | 51% ± 23% | |
placenta | 3 studies | 37% ± 6% | |
bone marrow | 3 studies | 26% ± 6% | |
adrenal gland | 3 studies | 25% ± 7% | |
prostate | 3 studies | 26% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 3406.99 | 258 / 258 | 100% | 227.93 | 230 / 230 |
esophagus | 100% | 2950.52 | 1445 / 1445 | 100% | 127.23 | 183 / 183 |
ovary | 100% | 2476.08 | 180 / 180 | 100% | 149.72 | 430 / 430 |
thymus | 100% | 2707.09 | 653 / 653 | 100% | 238.08 | 605 / 605 |
uterus | 100% | 2294.82 | 170 / 170 | 100% | 217.48 | 459 / 459 |
skin | 100% | 2013.66 | 1808 / 1809 | 100% | 189.70 | 472 / 472 |
brain | 100% | 3090.08 | 2640 / 2642 | 100% | 249.80 | 705 / 705 |
kidney | 100% | 3781.80 | 89 / 89 | 100% | 196.79 | 899 / 901 |
stomach | 100% | 1840.64 | 359 / 359 | 100% | 217.32 | 285 / 286 |
intestine | 100% | 2512.20 | 966 / 966 | 100% | 261.37 | 525 / 527 |
prostate | 100% | 2370.59 | 245 / 245 | 100% | 161.39 | 500 / 502 |
liver | 100% | 2192.33 | 225 / 226 | 100% | 171.41 | 406 / 406 |
lung | 100% | 2674.17 | 577 / 578 | 100% | 178.60 | 1151 / 1155 |
bladder | 100% | 2459.57 | 21 / 21 | 99% | 229.53 | 501 / 504 |
breast | 100% | 2243.97 | 459 / 459 | 98% | 120.27 | 1100 / 1118 |
pancreas | 98% | 1048.60 | 323 / 328 | 99% | 179.64 | 177 / 178 |
adipose | 100% | 2278.29 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 297.75 | 29 / 29 |
muscle | 100% | 5676.72 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2304.51 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 168.95 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 170.43 | 1 / 1 |
blood vessel | 100% | 2602.53 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 3234.98 | 855 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 117.06 | 79 / 80 |
peripheral blood | 95% | 1724.68 | 881 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0097428 | Biological process | protein maturation by iron-sulfur cluster transfer |
GO_0016226 | Biological process | iron-sulfur cluster assembly |
GO_0007059 | Biological process | chromosome segregation |
GO_0106035 | Biological process | protein maturation by [4Fe-4S] cluster transfer |
GO_0071817 | Cellular component | MMXD complex |
GO_0097361 | Cellular component | cytosolic [4Fe-4S] assembly targeting complex |
GO_0030496 | Cellular component | midbody |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005819 | Cellular component | spindle |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
Gene name | CIAO2B |
Protein name | Cytosolic iron-sulfur assembly component 2B Cytosolic iron-sulfur assembly component 2B (MSS19-interacting protein of 18 kDa) (Mitotic spindle-associated MMXD complex subunit MIP18) (Protein FAM96B) |
Synonyms | CIAB CGI-128 HSPC118 FAM96B MIP18 |
Description | FUNCTION: Component of the cytosolic iron-sulfur protein assembly (CIA) complex, a multiprotein complex that mediates the incorporation of iron-sulfur cluster into extramitochondrial Fe/S proteins . As a CIA complex component and in collaboration with CIAO1 and MMS19, binds to and facilitates the assembly of most cytosolic-nuclear Fe/S proteins . As part of the mitotic spindle-associated MMXD complex it plays a role in chromosome segregation, probably by facilitating iron-sulfur cluster assembly into ERCC2/XPD . Together with MMS19, facilitates the transfer of Fe-S clusters to the motor protein KIF4A, which ensures proper localization of KIF4A to mitotic machinery components to promote the progression of mitosis . . |
Accessions | H3BNV7 ENST00000562362.5 ENST00000567511.1 ENST00000568572.5 J3QLT9 J3KS95 Q9Y3D0 ENST00000422424.7 |