Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 15 studies | 33% ± 13% | |
lung | 14 studies | 35% ± 13% | |
intestine | 9 studies | 38% ± 20% | |
kidney | 8 studies | 33% ± 12% | |
eye | 7 studies | 28% ± 13% | |
brain | 5 studies | 27% ± 9% | |
liver | 5 studies | 40% ± 25% | |
pancreas | 4 studies | 40% ± 12% | |
bone marrow | 4 studies | 28% ± 12% | |
uterus | 4 studies | 41% ± 12% | |
lymph node | 4 studies | 22% ± 3% | |
thymus | 3 studies | 37% ± 16% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 3322.93 | 258 / 258 | 100% | 16.57 | 230 / 230 |
ovary | 100% | 2037.48 | 180 / 180 | 100% | 31.53 | 430 / 430 |
uterus | 100% | 2336.15 | 170 / 170 | 100% | 14.27 | 459 / 459 |
intestine | 100% | 3586.10 | 966 / 966 | 100% | 21.90 | 526 / 527 |
liver | 100% | 2329.90 | 226 / 226 | 100% | 16.41 | 405 / 406 |
stomach | 100% | 2660.27 | 359 / 359 | 100% | 20.52 | 285 / 286 |
esophagus | 100% | 3150.59 | 1445 / 1445 | 99% | 11.99 | 182 / 183 |
thymus | 100% | 2749.50 | 653 / 653 | 98% | 14.12 | 593 / 605 |
bladder | 100% | 2689.14 | 21 / 21 | 97% | 16.65 | 490 / 504 |
kidney | 100% | 3426.51 | 89 / 89 | 97% | 12.43 | 873 / 901 |
brain | 100% | 2960.61 | 2641 / 2642 | 97% | 15.25 | 683 / 705 |
prostate | 100% | 2552.20 | 245 / 245 | 97% | 11.31 | 486 / 502 |
pancreas | 99% | 1251.60 | 324 / 328 | 98% | 12.72 | 174 / 178 |
lung | 100% | 2476.42 | 577 / 578 | 93% | 9.28 | 1077 / 1155 |
breast | 100% | 2499.69 | 459 / 459 | 93% | 8.76 | 1038 / 1118 |
skin | 100% | 2314.78 | 1809 / 1809 | 89% | 8.95 | 418 / 472 |
adipose | 100% | 2684.25 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 11.71 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 23.91 | 29 / 29 |
spleen | 100% | 3690.84 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 38.50 | 1 / 1 |
muscle | 100% | 3694.39 | 802 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2367.85 | 1330 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 2620.34 | 856 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 4009.88 | 923 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 9.69 | 44 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0051036 | Biological process | regulation of endosome size |
GO_0062196 | Biological process | regulation of lysosome size |
GO_0031175 | Biological process | neuron projection development |
GO_0008089 | Biological process | anterograde axonal transport |
GO_0072384 | Biological process | organelle transport along microtubule |
GO_0032438 | Biological process | melanosome organization |
GO_0018394 | Biological process | peptidyl-lysine acetylation |
GO_0048490 | Biological process | anterograde synaptic vesicle transport |
GO_0016197 | Biological process | endosomal transport |
GO_0060155 | Biological process | platelet dense granule organization |
GO_0032418 | Biological process | lysosome localization |
GO_0009060 | Biological process | aerobic respiration |
GO_0005615 | Cellular component | extracellular space |
GO_0099078 | Cellular component | BORC complex |
GO_0005769 | Cellular component | early endosome |
GO_0005758 | Cellular component | mitochondrial intermembrane space |
GO_0098574 | Cellular component | cytoplasmic side of lysosomal membrane |
GO_0005829 | Cellular component | cytosol |
GO_0005759 | Cellular component | mitochondrial matrix |
GO_0031083 | Cellular component | BLOC-1 complex |
GO_1904115 | Cellular component | axon cytoplasm |
GO_0005765 | Cellular component | lysosomal membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | BLOC1S1 |
Protein name | Biogenesis of lysosome-related organelles complex 1 subunit 1 Biogenesis of lysosomal organelles complex 1 subunit 1 Biogenesis of lysosome-related organelles complex 1 subunit 1 (BLOC-1 subunit 1) (GCN5-like protein 1) (Protein RT14) |
Synonyms | BLOS1 GCN5L1 RT14 |
Description | FUNCTION: Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes. In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension . As part of the BORC complex may play a role in lysosomes movement and localization at the cell periphery. Associated with the cytosolic face of lysosomes, the BORC complex may recruit ARL8B and couple lysosomes to microtubule plus-end-directed kinesin motor . .; FUNCTION: May negatively regulate aerobic respiration through mitochondrial protein lysine-acetylation. May counteract the action of the deacetylase SIRT3 by acetylating and regulating proteins of the mitochondrial respiratory chain including ATP5F1A and NDUFA9. . FUNCTION: May negatively regulate aerobic respiration through mitochondrial protein lysine-acetylation. May counteract the action of the deacetylase SIRT3 by acetylating and regulating proteins of the mitochondrial respiratory chain including ATP5F1A and NDUFA9. . FUNCTION: May negatively regulate aerobic respiration through mitochondrial protein lysine-acetylation. May counteract the action of the deacetylase SIRT3 by acetylating and regulating proteins of the mitochondrial respiratory chain including ATP5F1A and NDUFA9. . FUNCTION: May negatively regulate aerobic respiration through mitochondrial protein lysine-acetylation. May counteract the action of the deacetylase SIRT3 by acetylating and regulating proteins of the mitochondrial respiratory chain including ATP5F1A and NDUFA9. . |
Accessions | ENST00000548556.1 ENST00000553100.1 F8W606 P78537 ENST00000551926.1 G8JLQ3 ENST00000548925.6 [P78537-1] H0YHA4 ENST00000547076.5 ENST00000549147.1 F8VP73 |