Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 14 studies | 27% ± 7% | |
lung | 12 studies | 30% ± 10% | |
intestine | 9 studies | 31% ± 15% | |
kidney | 8 studies | 26% ± 5% | |
eye | 5 studies | 23% ± 8% | |
liver | 5 studies | 27% ± 20% | |
pancreas | 3 studies | 29% ± 10% | |
lymph node | 3 studies | 26% ± 12% | |
brain | 3 studies | 35% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 8752.80 | 1445 / 1445 | 100% | 164.31 | 183 / 183 |
ovary | 100% | 4329.73 | 180 / 180 | 100% | 228.89 | 430 / 430 |
skin | 100% | 9214.43 | 1809 / 1809 | 100% | 241.90 | 472 / 472 |
uterus | 100% | 5487.26 | 170 / 170 | 100% | 247.12 | 459 / 459 |
liver | 100% | 8275.69 | 225 / 226 | 100% | 235.77 | 406 / 406 |
thymus | 100% | 6210.31 | 651 / 653 | 100% | 194.77 | 604 / 605 |
intestine | 100% | 11583.37 | 965 / 966 | 100% | 307.81 | 525 / 527 |
kidney | 100% | 11102.82 | 89 / 89 | 99% | 198.21 | 895 / 901 |
stomach | 100% | 10102.11 | 359 / 359 | 99% | 253.98 | 284 / 286 |
prostate | 100% | 6063.82 | 245 / 245 | 99% | 188.02 | 498 / 502 |
adrenal gland | 100% | 8865.09 | 258 / 258 | 99% | 155.09 | 228 / 230 |
bladder | 100% | 6661.48 | 21 / 21 | 99% | 255.15 | 499 / 504 |
breast | 100% | 5674.51 | 459 / 459 | 99% | 165.01 | 1106 / 1118 |
pancreas | 99% | 4097.33 | 324 / 328 | 100% | 157.97 | 178 / 178 |
brain | 99% | 7032.63 | 2608 / 2642 | 100% | 187.56 | 705 / 705 |
lung | 99% | 5234.20 | 572 / 578 | 99% | 161.25 | 1143 / 1155 |
eye | 0% | 0 | 0 / 0 | 100% | 183.94 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 225.28 | 29 / 29 |
muscle | 100% | 27531.85 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 5863.37 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 288.11 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 159.46 | 1 / 1 |
adipose | 100% | 5548.83 | 1201 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 7644.86 | 1331 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 26056.27 | 852 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 96% | 6388.45 | 896 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0043279 | Biological process | response to alkaloid |
GO_0006122 | Biological process | mitochondrial electron transport, ubiquinol to cytochrome c |
GO_0006119 | Biological process | oxidative phosphorylation |
GO_0009060 | Biological process | aerobic respiration |
GO_0045333 | Biological process | cellular respiration |
GO_0014823 | Biological process | response to activity |
GO_1902600 | Biological process | proton transmembrane transport |
GO_0005746 | Cellular component | mitochondrial respirasome |
GO_0005750 | Cellular component | mitochondrial respiratory chain complex III |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0005739 | Cellular component | mitochondrion |
GO_0044877 | Molecular function | protein-containing complex binding |
GO_0008121 | Molecular function | ubiquinol-cytochrome-c reductase activity |
GO_0031625 | Molecular function | ubiquitin protein ligase binding |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | UQCRC1 |
Protein name | Cytochrome b-c1 complex subunit 1, mitochondrial (Complex III subunit 1) (Core protein I) (Ubiquinol-cytochrome-c reductase complex core protein 1) Ubiquinol-cytochrome c reductase core protein 1 |
Synonyms | |
Description | FUNCTION: Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase. The cytochrome b-c1 complex catalyzes electron transfer from ubiquinol to cytochrome c, linking this redox reaction to translocation of protons across the mitochondrial inner membrane, with protons being carried across the membrane as hydrogens on the quinol. In the process called Q cycle, 2 protons are consumed from the matrix, 4 protons are released into the intermembrane space and 2 electrons are passed to cytochrome c (By similarity). The 2 core subunits UQCRC1/QCR1 and UQCRC2/QCR2 are homologous to the 2 mitochondrial-processing peptidase (MPP) subunits beta-MPP and alpha-MPP respectively, and they seem to have preserved their MPP processing properties (By similarity). May be involved in the in situ processing of UQCRFS1 into the mature Rieske protein and its mitochondrial targeting sequence (MTS)/subunit 9 when incorporated into complex III (Probable). Seems to play an important role in the maintenance of proper mitochondrial function in nigral dopaminergic neurons . . |
Accessions | ENST00000412343.5 F8WEF1 ENST00000415995.5 F8WER5 P31930 ENST00000203407.6 |