OCIAD2 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
CD4-positive, alpha-beta T cell	28 studies	39% ± 15%	Explore
CD8-positive, alpha-beta T cell	28 studies	34% ± 15%	Explore
T cell	26 studies	33% ± 13%	Explore
regulatory T cell	25 studies	38% ± 13%	Explore
natural killer cell	24 studies	25% ± 8%	Explore
B cell	23 studies	24% ± 8%	Explore
epithelial cell	18 studies	38% ± 23%	Explore
basal cell	17 studies	38% ± 19%	Explore
endothelial cell	17 studies	28% ± 12%	Explore
mature NK T cell	16 studies	27% ± 10%	Explore
memory B cell	15 studies	23% ± 5%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	15 studies	36% ± 11%	Explore
ciliated cell	15 studies	37% ± 21%	Explore
naive B cell	15 studies	26% ± 6%	Explore
gamma-delta T cell	14 studies	33% ± 16%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	13 studies	38% ± 13%	Explore
CD16-negative, CD56-bright natural killer cell, human	11 studies	31% ± 9%	Explore
endothelial cell of artery	11 studies	36% ± 11%	Explore
plasmacytoid dendritic cell	11 studies	28% ± 11%	Explore
CD4-positive, alpha-beta memory T cell	10 studies	37% ± 14%	Explore
CD8-positive, alpha-beta memory T cell	10 studies	34% ± 12%	Explore
goblet cell	10 studies	37% ± 13%	Explore
mucosal invariant T cell	10 studies	30% ± 5%	Explore
CD16-positive, CD56-dim natural killer cell, human	9 studies	22% ± 3%	Explore
abnormal cell	9 studies	36% ± 16%	Explore
effector memory CD8-positive, alpha-beta T cell	8 studies	32% ± 12%	Explore
enterocyte	8 studies	39% ± 16%	Explore
T follicular helper cell	8 studies	34% ± 7%	Explore
type I pneumocyte	7 studies	26% ± 13%	Explore
secretory cell	7 studies	38% ± 23%	Explore
epithelial cell of proximal tubule	7 studies	60% ± 15%	Explore
progenitor cell	7 studies	31% ± 7%	Explore
brush cell	7 studies	42% ± 24%	Explore
club cell	6 studies	37% ± 10%	Explore
effector CD8-positive, alpha-beta T cell	6 studies	31% ± 3%	Explore
kidney loop of Henle epithelial cell	6 studies	27% ± 6%	Explore
endothelial cell of vascular tree	6 studies	21% ± 3%	Explore
plasma cell	6 studies	29% ± 9%	Explore
neuron	6 studies	43% ± 21%	Explore
effector memory CD4-positive, alpha-beta T cell	6 studies	35% ± 16%	Explore
CD4-positive helper T cell	5 studies	21% ± 4%	Explore
exhausted T cell	5 studies	39% ± 11%	Explore
ionocyte	5 studies	35% ± 12%	Explore
respiratory goblet cell	5 studies	35% ± 16%	Explore
capillary endothelial cell	5 studies	20% ± 4%	Explore
enteroendocrine cell	5 studies	45% ± 21%	Explore
neuroendocrine cell	5 studies	75% ± 15%	Explore
immature B cell	5 studies	32% ± 15%	Explore
type II pneumocyte	5 studies	30% ± 18%	Explore
innate lymphoid cell	5 studies	25% ± 3%	Explore
pancreatic A cell	4 studies	41% ± 6%	Explore
type B pancreatic cell	4 studies	57% ± 16%	Explore
kidney distal convoluted tubule epithelial cell	4 studies	45% ± 12%	Explore
intestinal crypt stem cell	4 studies	32% ± 10%	Explore
precursor B cell	4 studies	26% ± 2%	Explore
retinal rod cell	4 studies	33% ± 18%	Explore
effector CD4-positive, alpha-beta T cell	4 studies	49% ± 3%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	26% ± 5%	Explore
GABAergic neuron	4 studies	21% ± 3%	Explore
glutamatergic neuron	4 studies	27% ± 7%	Explore
T-helper 17 cell	4 studies	29% ± 4%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	4 studies	25% ± 6%	Explore
hematopoietic precursor cell	3 studies	52% ± 21%	Explore
deuterosomal cell	3 studies	22% ± 5%	Explore
duct epithelial cell	3 studies	22% ± 4%	Explore
pancreatic D cell	3 studies	61% ± 19%	Explore
leukocyte	3 studies	25% ± 5%	Explore
transit amplifying cell	3 studies	24% ± 6%	Explore
retinal cone cell	3 studies	57% ± 15%	Explore
mucus secreting cell	3 studies	37% ± 8%	Explore
serous secreting cell	3 studies	29% ± 7%	Explore
intraepithelial lymphocyte	3 studies	38% ± 16%	Explore
acinar cell	3 studies	36% ± 17%	Explore
pancreatic ductal cell	3 studies	66% ± 5%	Explore
hepatocyte	3 studies	37% ± 22%	Explore
group 3 innate lymphoid cell	3 studies	37% ± 18%	Explore
T-helper 1 cell	3 studies	32% ± 4%	Explore
hematopoietic stem cell	3 studies	26% ± 5%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	33% ± 11%	Explore
central memory CD8-positive, alpha-beta T cell	3 studies	31% ± 12%	Explore
double negative thymocyte	3 studies	49% ± 19%	Explore
progenitor cell of mammary luminal epithelium	3 studies	23% ± 1%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	14 studies	24% ± 3%	Explore
lung	10 studies	33% ± 20%	Explore
kidney	9 studies	30% ± 9%	Explore
intestine	9 studies	24% ± 9%	Explore
lymph node	5 studies	32% ± 7%	Explore
pancreas	4 studies	48% ± 12%	Explore
liver	4 studies	23% ± 7%	Explore
thymus	3 studies	51% ± 23%	Explore
brain	3 studies	21% ± 4%	Explore
breast	3 studies	22% ± 3%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	100%	1499.91	653 / 653	100%	116.36	602 / 605
pancreas	100%	746.67	328 / 328	99%	154.45	177 / 178
intestine	100%	1276.44	963 / 966	100%	122.44	525 / 527
lung	99%	776.14	574 / 578	100%	115.07	1150 / 1155
prostate	100%	901.19	245 / 245	98%	55.19	493 / 502
stomach	99%	1442.01	354 / 359	99%	95.07	283 / 286
breast	99%	786.56	456 / 459	98%	63.93	1098 / 1118
kidney	100%	3981.57	89 / 89	97%	179.98	876 / 901
adrenal gland	100%	1002.14	258 / 258	97%	60.62	222 / 230
esophagus	97%	670.17	1403 / 1445	99%	67.41	181 / 183
bladder	95%	652.67	20 / 21	99%	115.75	499 / 504
uterus	95%	558.44	162 / 170	96%	100.31	442 / 459
ovary	92%	378.39	166 / 180	98%	66.62	423 / 430
liver	100%	1872.33	226 / 226	90%	65.51	365 / 406
brain	95%	946.76	2512 / 2642	34%	31.09	237 / 705
skin	96%	764.60	1736 / 1809	23%	10.08	109 / 472
lymph node	0%	0	0 / 0	100%	71.82	29 / 29
ureter	0%	0	0 / 0	100%	51.79	1 / 1
spleen	100%	573.04	240 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	98%	77.44	44 / 45
adipose	97%	480.79	1172 / 1204	0%	0	0 / 0
heart	93%	374.75	797 / 861	0%	0	0 / 0
blood vessel	78%	486.31	1045 / 1335	0%	0	0 / 0
peripheral blood	64%	577.53	593 / 929	0%	0	0 / 0
muscle	21%	52.63	171 / 803	0%	0	0 / 0
eye	0%	0	0 / 0	11%	3.55	9 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0