Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 14 studies | 29% ± 9% | |
lung | 10 studies | 30% ± 15% | |
intestine | 8 studies | 26% ± 10% | |
kidney | 7 studies | 21% ± 4% | |
liver | 6 studies | 28% ± 19% | |
lymph node | 4 studies | 28% ± 11% | |
pancreas | 3 studies | 30% ± 15% | |
bone marrow | 3 studies | 22% ± 2% | |
eye | 3 studies | 25% ± 6% | |
brain | 3 studies | 24% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2319.55 | 1445 / 1445 | 100% | 117.05 | 183 / 183 |
liver | 100% | 2186.54 | 226 / 226 | 100% | 147.21 | 406 / 406 |
ovary | 100% | 1529.85 | 180 / 180 | 100% | 148.95 | 430 / 430 |
pancreas | 100% | 2354.37 | 328 / 328 | 100% | 144.72 | 178 / 178 |
skin | 100% | 3181.67 | 1809 / 1809 | 100% | 187.39 | 472 / 472 |
uterus | 100% | 1855.47 | 170 / 170 | 100% | 208.26 | 459 / 459 |
thymus | 100% | 1957.96 | 653 / 653 | 100% | 155.45 | 604 / 605 |
brain | 100% | 2076.19 | 2635 / 2642 | 100% | 143.56 | 705 / 705 |
intestine | 100% | 2570.38 | 966 / 966 | 100% | 226.42 | 525 / 527 |
adrenal gland | 100% | 4158.13 | 258 / 258 | 100% | 163.90 | 229 / 230 |
prostate | 100% | 2443.33 | 245 / 245 | 99% | 203.53 | 499 / 502 |
stomach | 100% | 2182.68 | 359 / 359 | 99% | 184.83 | 284 / 286 |
kidney | 100% | 2421.46 | 89 / 89 | 99% | 136.03 | 894 / 901 |
breast | 100% | 2023.75 | 459 / 459 | 99% | 210.42 | 1109 / 1118 |
bladder | 100% | 2124.76 | 21 / 21 | 99% | 204.50 | 499 / 504 |
lung | 99% | 1777.75 | 573 / 578 | 99% | 156.86 | 1145 / 1155 |
adipose | 100% | 1901.50 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 196.71 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 272.54 | 29 / 29 |
spleen | 100% | 2993.52 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 179.44 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 366.08 | 1 / 1 |
muscle | 100% | 2343.12 | 801 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 1646.55 | 1327 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 1876.50 | 847 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 95% | 1913.27 | 885 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0032543 | Biological process | mitochondrial translation |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0005763 | Cellular component | mitochondrial small ribosomal subunit |
GO_0005739 | Cellular component | mitochondrion |
GO_0003735 | Molecular function | structural constituent of ribosome |
Gene name | MRPS34 |
Protein name | Small ribosomal subunit protein mS34 (28S ribosomal protein S34, mitochondrial) (MRP-S34) (S34mt) Mitochondrial ribosomal protein S34 |
Synonyms | |
Description | FUNCTION: Required for mitochondrial translation, plays a role in maintaining the stability of the small ribosomal subunit and the 12S rRNA that are required for mitoribosome formation. . |
Accessions | ENST00000397375.7 C9JJ19 ENST00000177742.7 P82930 |