Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 21 studies | 48% ± 15% | |
lung | 16 studies | 33% ± 12% | |
intestine | 11 studies | 25% ± 6% | |
kidney | 7 studies | 29% ± 11% | |
lymph node | 6 studies | 45% ± 11% | |
liver | 6 studies | 28% ± 12% | |
placenta | 5 studies | 35% ± 19% | |
brain | 5 studies | 34% ± 13% | |
bone marrow | 4 studies | 37% ± 12% | |
pancreas | 3 studies | 26% ± 7% | |
eye | 3 studies | 32% ± 6% | |
uterus | 3 studies | 39% ± 17% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 4492.89 | 2624 / 2642 | 100% | 102.24 | 705 / 705 |
intestine | 100% | 5502.03 | 964 / 966 | 98% | 78.37 | 518 / 527 |
lung | 100% | 8814.45 | 577 / 578 | 98% | 74.80 | 1132 / 1155 |
stomach | 100% | 7491.80 | 358 / 359 | 98% | 89.54 | 279 / 286 |
prostate | 98% | 3920.41 | 241 / 245 | 98% | 51.29 | 494 / 502 |
bladder | 100% | 5806.14 | 21 / 21 | 96% | 84.38 | 484 / 504 |
thymus | 96% | 3362.25 | 624 / 653 | 99% | 54.25 | 600 / 605 |
breast | 99% | 4612.50 | 453 / 459 | 96% | 69.38 | 1073 / 1118 |
uterus | 97% | 3644.61 | 165 / 170 | 98% | 79.55 | 448 / 459 |
kidney | 100% | 9040.04 | 89 / 89 | 92% | 71.22 | 833 / 901 |
esophagus | 73% | 1843.25 | 1049 / 1445 | 96% | 63.79 | 176 / 183 |
skin | 59% | 6509.63 | 1071 / 1809 | 100% | 156.26 | 470 / 472 |
ovary | 65% | 1622.54 | 117 / 180 | 92% | 39.92 | 396 / 430 |
adrenal gland | 96% | 2875.90 | 248 / 258 | 57% | 19.67 | 132 / 230 |
pancreas | 31% | 671.20 | 102 / 328 | 97% | 109.51 | 172 / 178 |
lymph node | 0% | 0 | 0 / 0 | 100% | 435.07 | 29 / 29 |
peripheral blood | 100% | 59828.64 | 929 / 929 | 0% | 0 | 0 / 0 |
spleen | 100% | 27148.92 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 34.46 | 1 / 1 |
adipose | 100% | 6850.12 | 1202 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 82.39 | 44 / 45 |
blood vessel | 84% | 2551.86 | 1124 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 81% | 34.15 | 65 / 80 |
liver | 32% | 841.21 | 73 / 226 | 43% | 17.87 | 174 / 406 |
heart | 33% | 768.58 | 283 / 861 | 0% | 0 | 0 / 0 |
muscle | 4% | 66.91 | 30 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0050832 | Biological process | defense response to fungus |
GO_0030833 | Biological process | regulation of actin filament polymerization |
GO_0008150 | Biological process | biological_process |
GO_0034774 | Cellular component | secretory granule lumen |
GO_1904813 | Cellular component | ficolin-1-rich granule lumen |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005829 | Cellular component | cytosol |
GO_0005576 | Cellular component | extracellular region |
GO_0030864 | Cellular component | cortical actin cytoskeleton |
GO_0030427 | Cellular component | site of polarized growth |
GO_0005884 | Cellular component | actin filament |
GO_0005634 | Cellular component | nucleus |
GO_0019899 | Molecular function | enzyme binding |
GO_0051015 | Molecular function | actin filament binding |
GO_0005515 | Molecular function | protein binding |
GO_0003779 | Molecular function | actin binding |
Gene name | COTL1 |
Protein name | Coactosin-like protein Coactosin like F-actin binding protein 1 |
Synonyms | CLP |
Description | FUNCTION: Binds to F-actin in a calcium-independent manner. Has no direct effect on actin depolymerization. Acts as a chaperone for ALOX5 (5LO), influencing both its stability and activity in leukotrienes synthesis. . |
Accessions | ENST00000564057.1 ENST00000567786.2 ENST00000262428.5 A0A087WWC7 H3BT58 Q14019 |