Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 11 studies | 27% ± 8% | |
intestine | 7 studies | 21% ± 4% | |
peripheral blood | 6 studies | 27% ± 7% | |
brain | 5 studies | 27% ± 4% | |
liver | 5 studies | 25% ± 8% | |
kidney | 4 studies | 19% ± 2% | |
eye | 4 studies | 21% ± 6% | |
uterus | 4 studies | 33% ± 13% | |
breast | 4 studies | 18% ± 1% | |
pancreas | 3 studies | 35% ± 13% | |
bone marrow | 3 studies | 19% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2544.09 | 1445 / 1445 | 100% | 37.71 | 183 / 183 |
intestine | 100% | 2816.63 | 966 / 966 | 100% | 55.14 | 527 / 527 |
prostate | 100% | 2918.49 | 245 / 245 | 100% | 66.30 | 502 / 502 |
uterus | 100% | 2502.18 | 170 / 170 | 100% | 51.15 | 459 / 459 |
breast | 100% | 2684.87 | 459 / 459 | 100% | 87.21 | 1117 / 1118 |
lung | 100% | 2747.17 | 578 / 578 | 100% | 44.02 | 1153 / 1155 |
bladder | 100% | 2127.90 | 21 / 21 | 100% | 44.50 | 503 / 504 |
liver | 100% | 3412.90 | 226 / 226 | 100% | 35.25 | 405 / 406 |
stomach | 100% | 2597.07 | 359 / 359 | 100% | 53.90 | 285 / 286 |
brain | 100% | 1780.32 | 2630 / 2642 | 100% | 30.36 | 705 / 705 |
thymus | 100% | 2281.91 | 653 / 653 | 100% | 36.39 | 602 / 605 |
kidney | 100% | 2807.88 | 89 / 89 | 99% | 37.92 | 894 / 901 |
pancreas | 100% | 1471.34 | 328 / 328 | 99% | 41.21 | 176 / 178 |
adrenal gland | 100% | 5822.02 | 258 / 258 | 99% | 45.16 | 227 / 230 |
ovary | 100% | 3263.97 | 180 / 180 | 99% | 31.73 | 424 / 430 |
skin | 100% | 3032.71 | 1808 / 1809 | 99% | 41.44 | 465 / 472 |
adipose | 100% | 2787.53 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2553.65 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 47.85 | 29 / 29 |
muscle | 100% | 2248.38 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1859.81 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 31.06 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 17.42 | 1 / 1 |
peripheral blood | 99% | 2931.89 | 920 / 929 | 0% | 0 | 0 / 0 |
heart | 97% | 1707.31 | 839 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 89% | 20.67 | 71 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1990314 | Biological process | cellular response to insulin-like growth factor stimulus |
GO_0032869 | Biological process | cellular response to insulin stimulus |
GO_0071364 | Biological process | cellular response to epidermal growth factor stimulus |
GO_0038203 | Biological process | TORC2 signaling |
GO_0030154 | Biological process | cell differentiation |
GO_0045600 | Biological process | positive regulation of fat cell differentiation |
GO_0071902 | Biological process | positive regulation of protein serine/threonine kinase activity |
GO_0048172 | Biological process | regulation of short-term neuronal synaptic plasticity |
GO_0036120 | Biological process | cellular response to platelet-derived growth factor stimulus |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0009898 | Cellular component | cytoplasmic side of plasma membrane |
GO_0043204 | Cellular component | perikaryon |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0042734 | Cellular component | presynaptic membrane |
GO_0030425 | Cellular component | dendrite |
GO_0005829 | Cellular component | cytosol |
GO_0045202 | Cellular component | synapse |
GO_0030426 | Cellular component | growth cone |
GO_0005737 | Cellular component | cytoplasm |
GO_0045211 | Cellular component | postsynaptic membrane |
GO_0030424 | Cellular component | axon |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
Gene name | SYAP1 |
Protein name | Synapse-associated protein 1 (BSD domain-containing signal transducer and Akt interactor protein) (BSTA) |
Synonyms | PRO3113 |
Description | FUNCTION: Plays a role in adipocyte differentiation by promoting mTORC2-mediated phosphorylation of AKT1 at 'Ser-473' after growth factor stimulation . . |
Accessions | Q96A49 ENST00000380155.4 |