Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 926.84 | 180 / 180 | 100% | 25.55 | 430 / 430 |
stomach | 100% | 819.88 | 359 / 359 | 100% | 20.17 | 286 / 286 |
esophagus | 100% | 954.73 | 1444 / 1445 | 100% | 20.49 | 183 / 183 |
lung | 100% | 1097.11 | 577 / 578 | 100% | 13.78 | 1155 / 1155 |
intestine | 100% | 1209.06 | 965 / 966 | 100% | 18.41 | 526 / 527 |
breast | 100% | 978.12 | 459 / 459 | 99% | 17.83 | 1111 / 1118 |
skin | 100% | 1455.27 | 1808 / 1809 | 99% | 12.86 | 469 / 472 |
bladder | 100% | 951.10 | 21 / 21 | 99% | 13.88 | 498 / 504 |
uterus | 100% | 948.62 | 170 / 170 | 98% | 13.17 | 451 / 459 |
prostate | 100% | 918.28 | 245 / 245 | 97% | 12.57 | 489 / 502 |
kidney | 100% | 880.91 | 89 / 89 | 97% | 10.89 | 877 / 901 |
brain | 98% | 514.66 | 2597 / 2642 | 99% | 9.60 | 697 / 705 |
pancreas | 99% | 503.95 | 324 / 328 | 98% | 12.45 | 175 / 178 |
thymus | 100% | 862.42 | 652 / 653 | 97% | 9.41 | 587 / 605 |
liver | 100% | 970.69 | 226 / 226 | 94% | 10.31 | 381 / 406 |
adrenal gland | 100% | 1156.52 | 258 / 258 | 88% | 7.59 | 202 / 230 |
adipose | 100% | 1008.01 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 22.19 | 29 / 29 |
spleen | 100% | 1462.28 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 14.60 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.20 | 1 / 1 |
blood vessel | 100% | 1004.37 | 1334 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 100% | 2345.15 | 926 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 9.18 | 77 / 80 |
heart | 91% | 343.43 | 780 / 861 | 0% | 0 | 0 / 0 |
muscle | 47% | 115.72 | 381 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0060271 | Biological process | cilium assembly |
GO_0061512 | Biological process | protein localization to cilium |
GO_0072659 | Biological process | protein localization to plasma membrane |
GO_0048169 | Biological process | regulation of long-term neuronal synaptic plasticity |
GO_0032869 | Biological process | cellular response to insulin stimulus |
GO_0048210 | Biological process | Golgi vesicle fusion to target membrane |
GO_0032456 | Biological process | endocytic recycling |
GO_0009306 | Biological process | protein secretion |
GO_0051223 | Biological process | regulation of protein transport |
GO_0007409 | Biological process | axonogenesis |
GO_0007030 | Biological process | Golgi organization |
GO_0006904 | Biological process | vesicle docking involved in exocytosis |
GO_0098887 | Biological process | neurotransmitter receptor transport, endosome to postsynaptic membrane |
GO_0006887 | Biological process | exocytosis |
GO_0010506 | Biological process | regulation of autophagy |
GO_0099003 | Biological process | vesicle-mediated transport in synapse |
GO_0006914 | Biological process | autophagy |
GO_0098969 | Biological process | neurotransmitter receptor transport to postsynaptic membrane |
GO_0098978 | Cellular component | glutamatergic synapse |
GO_0030496 | Cellular component | midbody |
GO_0005886 | Cellular component | plasma membrane |
GO_0043197 | Cellular component | dendritic spine |
GO_0005813 | Cellular component | centrosome |
GO_0070062 | Cellular component | extracellular exosome |
GO_0055038 | Cellular component | recycling endosome membrane |
GO_0043025 | Cellular component | neuronal cell body |
GO_0005814 | Cellular component | centriole |
GO_0060170 | Cellular component | ciliary membrane |
GO_0032588 | Cellular component | trans-Golgi network membrane |
GO_0000139 | Cellular component | Golgi membrane |
GO_0097730 | Cellular component | non-motile cilium |
GO_0005929 | Cellular component | cilium |
GO_0005829 | Cellular component | cytosol |
GO_0008021 | Cellular component | synaptic vesicle |
GO_0045335 | Cellular component | phagocytic vesicle |
GO_0014069 | Cellular component | postsynaptic density |
GO_0030140 | Cellular component | trans-Golgi network transport vesicle |
GO_0097546 | Cellular component | ciliary base |
GO_0030670 | Cellular component | phagocytic vesicle membrane |
GO_0010008 | Cellular component | endosome membrane |
GO_0036064 | Cellular component | ciliary basal body |
GO_0005768 | Cellular component | endosome |
GO_0019003 | Molecular function | GDP binding |
GO_0031267 | Molecular function | small GTPase binding |
GO_1990782 | Molecular function | protein tyrosine kinase binding |
GO_0005525 | Molecular function | GTP binding |
GO_0031489 | Molecular function | myosin V binding |
GO_0005515 | Molecular function | protein binding |
GO_0003924 | Molecular function | GTPase activity |
Gene name | RAB8A |
Protein name | Ras-related protein Rab-8A (EC 3.6.5.2) (Oncogene c-mel) |
Synonyms | MEL RAB8 |
Description | FUNCTION: The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes. Rabs cycle between an inactive GDP-bound form and an active GTP-bound form that is able to recruit to membranes different sets of downstream effectors directly responsible for vesicle formation, movement, tethering and fusion. That Rab is involved in polarized vesicular trafficking and neurotransmitter release. Together with RAB11A, RAB3IP, the exocyst complex, PARD3, PRKCI, ANXA2, CDC42 and DNMBP promotes transcytosis of PODXL to the apical membrane initiation sites (AMIS), apical surface formation and lumenogenesis . Regulates the compacted morphology of the Golgi . Together with MYO5B and RAB11A participates in epithelial cell polarization . Also involved in membrane trafficking to the cilium and ciliogenesis . Together with MICALL2, may also regulate adherens junction assembly (By similarity). May play a role in insulin-induced transport to the plasma membrane of the glucose transporter GLUT4 and therefore play a role in glucose homeostasis (By similarity). Involved in autophagy . Participates in the export of a subset of neosynthesized proteins through a Rab8-Rab10-Rab11-dependent endososomal export route . . |
Accessions | P61006 ENST00000300935.8 [P61006-1] ENST00000586682.1 [P61006-2] |