Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 12 studies | 23% ± 4% | |
lung | 11 studies | 30% ± 16% | |
kidney | 9 studies | 27% ± 6% | |
intestine | 6 studies | 27% ± 11% | |
brain | 5 studies | 32% ± 14% | |
lymph node | 4 studies | 23% ± 5% | |
liver | 4 studies | 26% ± 14% | |
placenta | 3 studies | 34% ± 6% | |
bone marrow | 3 studies | 21% ± 3% | |
eye | 3 studies | 23% ± 4% | |
uterus | 3 studies | 34% ± 18% | |
thymus | 3 studies | 42% ± 14% | |
breast | 3 studies | 21% ± 1% | |
prostate | 3 studies | 31% ± 8% | |
skin | 3 studies | 24% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 5564.62 | 653 / 653 | 100% | 56.78 | 605 / 605 |
uterus | 100% | 1943.45 | 170 / 170 | 100% | 28.81 | 459 / 459 |
bladder | 100% | 2317.43 | 21 / 21 | 100% | 24.86 | 503 / 504 |
esophagus | 99% | 1664.15 | 1437 / 1445 | 100% | 14.56 | 183 / 183 |
breast | 100% | 2145.19 | 459 / 459 | 99% | 22.74 | 1111 / 1118 |
skin | 100% | 2262.71 | 1805 / 1809 | 99% | 37.40 | 469 / 472 |
lung | 99% | 2015.99 | 574 / 578 | 100% | 22.68 | 1153 / 1155 |
kidney | 100% | 5154.92 | 89 / 89 | 99% | 22.35 | 892 / 901 |
ovary | 99% | 1947.27 | 178 / 180 | 100% | 30.29 | 430 / 430 |
intestine | 100% | 2885.42 | 966 / 966 | 98% | 17.63 | 518 / 527 |
brain | 98% | 1608.78 | 2584 / 2642 | 100% | 23.95 | 705 / 705 |
prostate | 99% | 1730.15 | 243 / 245 | 99% | 12.52 | 495 / 502 |
adrenal gland | 100% | 3088.00 | 258 / 258 | 97% | 15.28 | 224 / 230 |
stomach | 99% | 1926.02 | 354 / 359 | 99% | 16.67 | 282 / 286 |
liver | 99% | 1222.79 | 223 / 226 | 91% | 10.71 | 370 / 406 |
pancreas | 62% | 431.84 | 203 / 328 | 97% | 16.51 | 173 / 178 |
lymph node | 0% | 0 | 0 / 0 | 100% | 40.44 | 29 / 29 |
spleen | 100% | 1506.69 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 20.10 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 17.91 | 1 / 1 |
blood vessel | 100% | 4259.92 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 2608.12 | 1203 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 22.67 | 79 / 80 |
muscle | 98% | 2143.48 | 783 / 803 | 0% | 0 | 0 / 0 |
heart | 92% | 1413.41 | 796 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 77% | 1367.41 | 717 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006412 | Biological process | translation |
GO_0032543 | Biological process | mitochondrial translation |
GO_0015935 | Cellular component | small ribosomal subunit |
GO_0005763 | Cellular component | mitochondrial small ribosomal subunit |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0005739 | Cellular component | mitochondrion |
GO_0070181 | Molecular function | small ribosomal subunit rRNA binding |
GO_0003735 | Molecular function | structural constituent of ribosome |
GO_0005515 | Molecular function | protein binding |
Gene name | MRPS6 |
Protein name | Small ribosomal subunit protein bS6m (28S ribosomal protein S6, mitochondrial) (MRP-S6) (S6mt) |
Synonyms | C21orf101 RPMS6 |
Description | |
Accessions | ENST00000399312.3 P82932 |