CNIH1 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
fibroblast	23 studies	27% ± 11%	Explore
CD4-positive, alpha-beta T cell	19 studies	23% ± 8%	Explore
endothelial cell	19 studies	26% ± 10%	Explore
regulatory T cell	16 studies	27% ± 6%	Explore
B cell	15 studies	23% ± 7%	Explore
classical monocyte	15 studies	24% ± 9%	Explore
mast cell	14 studies	29% ± 7%	Explore
conventional dendritic cell	14 studies	27% ± 13%	Explore
smooth muscle cell	14 studies	20% ± 4%	Explore
CD8-positive, alpha-beta T cell	14 studies	22% ± 7%	Explore
macrophage	13 studies	21% ± 6%	Explore
basal cell	12 studies	29% ± 17%	Explore
epithelial cell	12 studies	30% ± 19%	Explore
endothelial cell of lymphatic vessel	11 studies	24% ± 8%	Explore
T cell	11 studies	22% ± 8%	Explore
connective tissue cell	11 studies	27% ± 10%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	10 studies	23% ± 4%	Explore
pericyte	10 studies	25% ± 7%	Explore
memory B cell	10 studies	19% ± 3%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	9 studies	22% ± 4%	Explore
endothelial cell of vascular tree	9 studies	22% ± 3%	Explore
ciliated cell	9 studies	36% ± 16%	Explore
naive B cell	8 studies	19% ± 4%	Explore
non-classical monocyte	8 studies	24% ± 10%	Explore
myofibroblast cell	8 studies	25% ± 6%	Explore
vein endothelial cell	8 studies	21% ± 5%	Explore
T follicular helper cell	8 studies	31% ± 11%	Explore
abnormal cell	8 studies	22% ± 5%	Explore
plasmacytoid dendritic cell	8 studies	26% ± 7%	Explore
dendritic cell	7 studies	31% ± 17%	Explore
mucosal invariant T cell	7 studies	19% ± 4%	Explore
CD4-positive, alpha-beta memory T cell	6 studies	25% ± 6%	Explore
monocyte	6 studies	20% ± 3%	Explore
enterocyte	6 studies	21% ± 4%	Explore
mesothelial cell	6 studies	35% ± 18%	Explore
natural killer cell	6 studies	22% ± 5%	Explore
gamma-delta T cell	6 studies	24% ± 15%	Explore
plasma cell	5 studies	23% ± 10%	Explore
CD16-negative, CD56-bright natural killer cell, human	5 studies	19% ± 3%	Explore
effector memory CD8-positive, alpha-beta T cell	5 studies	19% ± 2%	Explore
progenitor cell	5 studies	24% ± 2%	Explore
neuron	5 studies	27% ± 11%	Explore
type II pneumocyte	5 studies	25% ± 15%	Explore
effector CD8-positive, alpha-beta T cell	5 studies	18% ± 3%	Explore
hematopoietic precursor cell	4 studies	28% ± 10%	Explore
plasmablast	4 studies	45% ± 21%	Explore
exhausted T cell	4 studies	24% ± 5%	Explore
endothelial cell of artery	4 studies	19% ± 1%	Explore
intestinal crypt stem cell	4 studies	25% ± 5%	Explore
leukocyte	4 studies	18% ± 3%	Explore
hematopoietic stem cell	4 studies	24% ± 6%	Explore
myeloid cell	4 studies	25% ± 8%	Explore
capillary endothelial cell	4 studies	21% ± 2%	Explore
precursor B cell	4 studies	24% ± 9%	Explore
retina horizontal cell	4 studies	28% ± 10%	Explore
effector CD4-positive, alpha-beta T cell	4 studies	26% ± 5%	Explore
glutamatergic neuron	4 studies	39% ± 13%	Explore
effector memory CD4-positive, alpha-beta T cell	4 studies	23% ± 5%	Explore
transit amplifying cell	4 studies	18% ± 2%	Explore
epithelial cell of proximal tubule	3 studies	22% ± 0%	Explore
neural crest cell	3 studies	21% ± 2%	Explore
common myeloid progenitor	3 studies	32% ± 20%	Explore
lymphocyte	3 studies	21% ± 5%	Explore
immature B cell	3 studies	18% ± 3%	Explore
pro-B cell	3 studies	26% ± 2%	Explore
astrocyte	3 studies	22% ± 6%	Explore
alveolar macrophage	3 studies	16% ± 1%	Explore
serous secreting cell	3 studies	19% ± 0%	Explore
germinal center B cell	3 studies	30% ± 9%	Explore
luminal hormone-sensing cell of mammary gland	3 studies	19% ± 2%	Explore
myoepithelial cell	3 studies	25% ± 5%	Explore
granulocyte	3 studies	25% ± 11%	Explore
GABAergic neuron	3 studies	39% ± 7%	Explore
enteroendocrine cell	3 studies	34% ± 14%	Explore
group 3 innate lymphoid cell	3 studies	25% ± 9%	Explore
secretory cell	3 studies	36% ± 19%	Explore
CD8-positive, alpha-beta memory T cell	3 studies	26% ± 11%	Explore
mature NK T cell	3 studies	22% ± 6%	Explore
hepatocyte	3 studies	59% ± 29%	Explore
oligodendrocyte precursor cell	3 studies	22% ± 3%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
peripheral blood	13 studies	22% ± 5%	Explore
lung	10 studies	28% ± 15%	Explore
intestine	6 studies	25% ± 11%	Explore
brain	5 studies	29% ± 12%	Explore
kidney	4 studies	18% ± 1%	Explore
lymph node	4 studies	20% ± 1%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	3319.85	1445 / 1445	100%	67.51	183 / 183
liver	100%	4903.74	226 / 226	100%	57.20	406 / 406
ovary	100%	2574.63	180 / 180	100%	59.40	430 / 430
breast	100%	3283.52	459 / 459	100%	61.24	1117 / 1118
brain	100%	2750.22	2639 / 2642	100%	60.01	705 / 705
lung	100%	3002.29	577 / 578	100%	65.17	1155 / 1155
intestine	100%	3685.65	966 / 966	100%	63.30	526 / 527
uterus	100%	3661.51	170 / 170	100%	48.60	458 / 459
stomach	100%	2457.58	359 / 359	100%	59.93	285 / 286
bladder	100%	4479.43	21 / 21	99%	52.84	501 / 504
prostate	100%	2867.07	244 / 245	100%	52.35	501 / 502
thymus	100%	2540.63	653 / 653	99%	42.41	601 / 605
kidney	100%	2349.61	89 / 89	98%	44.86	886 / 901
adrenal gland	100%	4098.52	258 / 258	98%	49.85	226 / 230
skin	100%	4299.09	1805 / 1809	98%	60.01	462 / 472
pancreas	97%	1518.28	319 / 328	99%	50.69	176 / 178
adipose	100%	3996.81	1204 / 1204	0%	0	0 / 0
blood vessel	100%	4451.19	1335 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	38.28	29 / 29
spleen	100%	1848.85	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	50.76	45 / 45
ureter	0%	0	0 / 0	100%	30.38	1 / 1
muscle	100%	1889.37	799 / 803	0%	0	0 / 0
heart	98%	2435.41	841 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	98%	47.53	78 / 80
peripheral blood	76%	1506.19	708 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0007165	Biological process	signal transduction
GO_0006955	Biological process	immune response
GO_0016192	Biological process	vesicle-mediated transport
GO_0033116	Cellular component	endoplasmic reticulum-Golgi intermediate compartment membrane
GO_0012507	Cellular component	ER to Golgi transport vesicle membrane
GO_0000139	Cellular component	Golgi membrane
GO_0005789	Cellular component	endoplasmic reticulum membrane
GO_0005515	Molecular function	protein binding

IV. Literature review

[source]

Gene name	CNIH1
Protein name	Cornichon family AMPA receptor auxiliary protein 1 (Cornichon homolog (Drosophila), isoform CRA_b) Protein cornichon homolog 1 (CNIH-1) (Cornichon family AMPA receptor auxiliary protein 1) (Protein cornichon homolog) (T-cell growth-associated molecule 77) (TGAM77) Cornichon family AMPA receptor auxiliary protein 1 Cornichon family AMPA receptor auxiliary protein 1 (Cornichon homolog (Drosophila), isoform CRA_c)
Synonyms	CNIL hCG_1785850 UNQ155/PRO181 CNIH
Description	FUNCTION: Involved in the selective transport and maturation of TGF-alpha family proteins. .
Accessions	G3V3B2 ENST00000557659.5 G3V5P8 ENST00000395573.8 G3V4K0 O95406 ENST00000557690.5 G3V474 ENST00000554683.1 ENST00000216416.9 ENST00000556113.1 ENST00000553660.5 A8MVW4 G3V5Q6

CNIH1 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review