Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 8 studies | 25% ± 16% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 7860.04 | 578 / 578 | 95% | 65.26 | 1099 / 1155 |
breast | 99% | 1797.28 | 455 / 459 | 96% | 52.35 | 1069 / 1118 |
kidney | 96% | 1359.93 | 85 / 89 | 91% | 58.86 | 819 / 901 |
thymus | 89% | 1164.45 | 582 / 653 | 93% | 68.38 | 560 / 605 |
liver | 99% | 4281.09 | 223 / 226 | 81% | 28.93 | 329 / 406 |
brain | 74% | 811.95 | 1950 / 2642 | 97% | 50.51 | 683 / 705 |
intestine | 91% | 1712.48 | 882 / 966 | 77% | 26.47 | 408 / 527 |
ovary | 72% | 693.26 | 129 / 180 | 93% | 40.85 | 401 / 430 |
bladder | 90% | 1739.62 | 19 / 21 | 74% | 29.53 | 374 / 504 |
skin | 64% | 671.44 | 1161 / 1809 | 87% | 58.89 | 411 / 472 |
esophagus | 74% | 738.07 | 1070 / 1445 | 76% | 22.72 | 139 / 183 |
prostate | 83% | 806.72 | 204 / 245 | 65% | 14.63 | 326 / 502 |
stomach | 65% | 623.98 | 233 / 359 | 83% | 32.07 | 237 / 286 |
uterus | 66% | 586.60 | 112 / 170 | 79% | 28.89 | 364 / 459 |
adrenal gland | 92% | 1458.00 | 237 / 258 | 48% | 11.61 | 111 / 230 |
pancreas | 46% | 369.67 | 152 / 328 | 92% | 44.92 | 163 / 178 |
lymph node | 0% | 0 | 0 / 0 | 100% | 165.33 | 29 / 29 |
spleen | 100% | 13842.92 | 241 / 241 | 0% | 0 | 0 / 0 |
adipose | 100% | 3697.50 | 1202 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 55.27 | 41 / 45 |
peripheral blood | 87% | 4179.46 | 805 / 929 | 0% | 0 | 0 / 0 |
blood vessel | 78% | 1343.43 | 1036 / 1335 | 0% | 0 | 0 / 0 |
heart | 60% | 595.90 | 516 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 59% | 15.41 | 47 / 80 |
muscle | 5% | 29.46 | 37 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0050870 | Biological process | positive regulation of T cell activation |
GO_0035723 | Biological process | interleukin-15-mediated signaling pathway |
GO_0007169 | Biological process | cell surface receptor protein tyrosine kinase signaling pathway |
GO_0050850 | Biological process | positive regulation of calcium-mediated signaling |
GO_0019722 | Biological process | calcium-mediated signaling |
GO_0051924 | Biological process | regulation of calcium ion transport |
GO_0030225 | Biological process | macrophage differentiation |
GO_0050829 | Biological process | defense response to Gram-negative bacterium |
GO_0007165 | Biological process | signal transduction |
GO_0007167 | Biological process | enzyme-linked receptor protein signaling pathway |
GO_0046598 | Biological process | positive regulation of viral entry into host cell |
GO_0035397 | Biological process | helper T cell enhancement of adaptive immune response |
GO_0007155 | Biological process | cell adhesion |
GO_0001934 | Biological process | positive regulation of protein phosphorylation |
GO_0043410 | Biological process | positive regulation of MAPK cascade |
GO_0045657 | Biological process | positive regulation of monocyte differentiation |
GO_0045860 | Biological process | positive regulation of protein kinase activity |
GO_0032743 | Biological process | positive regulation of interleukin-2 production |
GO_0097011 | Biological process | cellular response to granulocyte macrophage colony-stimulating factor stimulus |
GO_0006955 | Biological process | immune response |
GO_0002250 | Biological process | adaptive immune response |
GO_0030217 | Biological process | T cell differentiation |
GO_0033674 | Biological process | positive regulation of kinase activity |
GO_0046718 | Biological process | symbiont entry into host cell |
GO_0045058 | Biological process | T cell selection |
GO_0050731 | Biological process | positive regulation of peptidyl-tyrosine phosphorylation |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_0043123 | Biological process | positive regulation of canonical NF-kappaB signal transduction |
GO_0050863 | Biological process | regulation of T cell activation |
GO_0070374 | Biological process | positive regulation of ERK1 and ERK2 cascade |
GO_0042110 | Biological process | T cell activation |
GO_0032507 | Biological process | maintenance of protein location in cell |
GO_0007166 | Biological process | cell surface receptor signaling pathway |
GO_0009897 | Cellular component | external side of plasma membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0045121 | Cellular component | membrane raft |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0005769 | Cellular component | early endosome |
GO_0030669 | Cellular component | clathrin-coated endocytic vesicle membrane |
GO_0005788 | Cellular component | endoplasmic reticulum lumen |
GO_0042101 | Cellular component | T cell receptor complex |
GO_0019899 | Molecular function | enzyme binding |
GO_0015026 | Molecular function | coreceptor activity |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0038023 | Molecular function | signaling receptor activity |
GO_0008289 | Molecular function | lipid binding |
GO_0042289 | Molecular function | MHC class II protein binding |
GO_0004888 | Molecular function | transmembrane signaling receptor activity |
GO_0005201 | Molecular function | extracellular matrix structural constituent |
GO_0042011 | Molecular function | interleukin-16 binding |
GO_0019901 | Molecular function | protein kinase binding |
GO_0042802 | Molecular function | identical protein binding |
GO_0042012 | Molecular function | interleukin-16 receptor activity |
GO_0001618 | Molecular function | virus receptor activity |
GO_1990782 | Molecular function | protein tyrosine kinase binding |
GO_0008270 | Molecular function | zinc ion binding |
GO_0023026 | Molecular function | MHC class II protein complex binding |
GO_0005515 | Molecular function | protein binding |
Gene name | CD4 |
Protein name | T-cell surface glycoprotein CD4 (T-cell surface antigen T4/Leu-3) (CD antigen CD4) Surface glycoprotein variant T-cell surface glycoprotein CD4 (T-cell surface antigen T4/Leu-3) CD4 molecule CD4 protein (CD4 receptor) |
Synonyms | |
Description | FUNCTION: Integral membrane glycoprotein that plays an essential role in the immune response and serves multiple functions in responses against both external and internal offenses. In T-cells, functions primarily as a coreceptor for MHC class II molecule:peptide complex. The antigens presented by class II peptides are derived from extracellular proteins while class I peptides are derived from cytosolic proteins. Interacts simultaneously with the T-cell receptor (TCR) and the MHC class II presented by antigen presenting cells (APCs). In turn, recruits the Src kinase LCK to the vicinity of the TCR-CD3 complex. LCK then initiates different intracellular signaling pathways by phosphorylating various substrates ultimately leading to lymphokine production, motility, adhesion and activation of T-helper cells. In other cells such as macrophages or NK cells, plays a role in differentiation/activation, cytokine expression and cell migration in a TCR/LCK-independent pathway. Participates in the development of T-helper cells in the thymus and triggers the differentiation of monocytes into functional mature macrophages. .; FUNCTION: (Microbial infection) Primary receptor for human immunodeficiency virus-1 (HIV-1) . Down-regulated by HIV-1 Vpu . Acts as a receptor for Human Herpes virus 7/HHV-7 . . |
Accessions | Q13969 ENST00000541982.5 Q6LCP8 A0A4Y5UGE4 F5H480 ENST00000539492.1 F5GYA9 ENST00000011653.9 P01730 |