Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
kidney | 100% | 5584.94 | 89 / 89 | 94% | 36.08 | 851 / 901 |
breast | 71% | 2279.60 | 327 / 459 | 94% | 101.89 | 1047 / 1118 |
thymus | 94% | 1102.56 | 612 / 653 | 50% | 11.90 | 305 / 605 |
intestine | 60% | 1946.63 | 584 / 966 | 71% | 30.43 | 374 / 527 |
bladder | 52% | 1119.33 | 11 / 21 | 75% | 27.72 | 376 / 504 |
lung | 92% | 905.13 | 532 / 578 | 35% | 7.87 | 400 / 1155 |
stomach | 70% | 866.99 | 251 / 359 | 55% | 28.26 | 156 / 286 |
pancreas | 91% | 994.25 | 300 / 328 | 26% | 5.58 | 47 / 178 |
uterus | 29% | 400.50 | 50 / 170 | 78% | 32.68 | 356 / 459 |
skin | 72% | 5840.48 | 1305 / 1809 | 32% | 9.36 | 153 / 472 |
spleen | 100% | 2399.90 | 241 / 241 | 0% | 0 | 0 / 0 |
esophagus | 40% | 2509.84 | 574 / 1445 | 55% | 13.61 | 101 / 183 |
tonsil | 0% | 0 | 0 / 0 | 84% | 27.12 | 38 / 45 |
prostate | 72% | 1070.98 | 177 / 245 | 5% | 0.55 | 25 / 502 |
peripheral blood | 75% | 1349.28 | 700 / 929 | 0% | 0 | 0 / 0 |
brain | 31% | 248.72 | 814 / 2642 | 20% | 3.62 | 141 / 705 |
ovary | 1% | 3.28 | 1 / 180 | 43% | 14.60 | 183 / 430 |
lymph node | 0% | 0 | 0 / 0 | 41% | 4.82 | 12 / 29 |
adipose | 38% | 291.86 | 455 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 11% | 1.86 | 9 / 80 |
liver | 1% | 6.88 | 2 / 226 | 10% | 2.55 | 40 / 406 |
adrenal gland | 5% | 30.87 | 12 / 258 | 5% | 0.57 | 11 / 230 |
blood vessel | 5% | 40.12 | 68 / 1335 | 0% | 0 | 0 / 0 |
heart | 4% | 28.48 | 37 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0001525 | Biological process | angiogenesis |
GO_0030032 | Biological process | lamellipodium assembly |
GO_0051056 | Biological process | regulation of small GTPase mediated signal transduction |
GO_0006974 | Biological process | DNA damage response |
GO_0030593 | Biological process | neutrophil chemotaxis |
GO_0050853 | Biological process | B cell receptor signaling pathway |
GO_0038095 | Biological process | Fc-epsilon receptor signaling pathway |
GO_0045785 | Biological process | positive regulation of cell adhesion |
GO_0030168 | Biological process | platelet activation |
GO_0007229 | Biological process | integrin-mediated signaling pathway |
GO_0043087 | Biological process | regulation of GTPase activity |
GO_0030890 | Biological process | positive regulation of B cell proliferation |
GO_0007264 | Biological process | small GTPase-mediated signal transduction |
GO_0051897 | Biological process | positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction |
GO_0008361 | Biological process | regulation of cell size |
GO_0006906 | Biological process | vesicle fusion |
GO_0009410 | Biological process | response to xenobiotic stimulus |
GO_0016477 | Biological process | cell migration |
GO_0038096 | Biological process | Fc-gamma receptor signaling pathway involved in phagocytosis |
GO_0001772 | Cellular component | immunological synapse |
GO_0005886 | Cellular component | plasma membrane |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0005085 | Molecular function | guanyl-nucleotide exchange factor activity |
GO_0005154 | Molecular function | epidermal growth factor receptor binding |
GO_0005096 | Molecular function | GTPase activator activity |
GO_0046872 | Molecular function | metal ion binding |
GO_0005515 | Molecular function | protein binding |
Gene name | VAV3 |
Protein name | Vav guanine nucleotide exchange factor 3 VAV3 Guanine nucleotide exchange factor VAV3 (VAV-3) |
Synonyms | |
Description | FUNCTION: Exchange factor for GTP-binding proteins RhoA, RhoG and, to a lesser extent, Rac1. Binds physically to the nucleotide-free states of those GTPases. Plays an important role in angiogenesis. Its recruitment by phosphorylated EPHA2 is critical for EFNA1-induced RAC1 GTPase activation and vascular endothelial cell migration and assembly (By similarity). May be important for integrin-mediated signaling, at least in some cell types. In osteoclasts, along with SYK tyrosine kinase, required for signaling through integrin alpha-v/beta-1 (ITAGV-ITGB1), a crucial event for osteoclast proper cytoskeleton organization and function. This signaling pathway involves RAC1, but not RHO, activation. Necessary for proper wound healing. In the course of wound healing, required for the phagocytotic cup formation preceding macrophage phagocytosis of apoptotic neutrophils. Responsible for integrin beta-2 (ITGB2)-mediated macrophage adhesion and, to a lesser extent, contributes to beta-3 (ITGB3)-mediated adhesion. Does not affect integrin beta-1 (ITGB1)-mediated adhesion (By similarity). . |
Accessions | ENST00000370056.9 [Q9UKW4-1] E9PMJ5 H0YCG7 Q9UKW4 ENST00000415432.6 [Q9UKW4-3] H0YDG2 A0A2X0U2Q1 ENST00000529809.5 ENST00000527011.5 [Q9UKW4-4] ENST00000490388.2 ENST00000529413.5 ENST00000525231.5 |