TRAPPC6A report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
natural killer cell	17 studies	22% ± 5%	Explore
CD4-positive, alpha-beta T cell	17 studies	23% ± 7%	Explore
B cell	13 studies	22% ± 6%	Explore
CD8-positive, alpha-beta T cell	12 studies	22% ± 8%	Explore
regulatory T cell	11 studies	23% ± 6%	Explore
gamma-delta T cell	10 studies	22% ± 8%	Explore
CD16-negative, CD56-bright natural killer cell, human	9 studies	26% ± 6%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	9 studies	24% ± 4%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	9 studies	28% ± 9%	Explore
CD16-positive, CD56-dim natural killer cell, human	8 studies	21% ± 2%	Explore
conventional dendritic cell	8 studies	27% ± 16%	Explore
mature NK T cell	8 studies	22% ± 8%	Explore
T cell	8 studies	20% ± 4%	Explore
epithelial cell	7 studies	36% ± 22%	Explore
memory B cell	7 studies	18% ± 2%	Explore
mucosal invariant T cell	7 studies	21% ± 2%	Explore
naive B cell	6 studies	17% ± 3%	Explore
ciliated cell	6 studies	29% ± 11%	Explore
plasmacytoid dendritic cell	6 studies	24% ± 7%	Explore
CD4-positive, alpha-beta memory T cell	6 studies	26% ± 6%	Explore
classical monocyte	5 studies	20% ± 6%	Explore
effector memory CD8-positive, alpha-beta T cell	5 studies	25% ± 9%	Explore
non-classical monocyte	5 studies	24% ± 7%	Explore
epithelial cell of proximal tubule	5 studies	25% ± 4%	Explore
T follicular helper cell	5 studies	18% ± 2%	Explore
CD8-positive, alpha-beta memory T cell	5 studies	23% ± 8%	Explore
hematopoietic precursor cell	4 studies	35% ± 14%	Explore
plasma cell	4 studies	22% ± 7%	Explore
kidney loop of Henle epithelial cell	4 studies	23% ± 2%	Explore
effector CD4-positive, alpha-beta T cell	4 studies	30% ± 10%	Explore
effector CD8-positive, alpha-beta T cell	4 studies	20% ± 3%	Explore
effector memory CD4-positive, alpha-beta T cell	4 studies	27% ± 9%	Explore
basal cell	4 studies	32% ± 15%	Explore
exhausted T cell	3 studies	25% ± 6%	Explore
hematopoietic stem cell	3 studies	25% ± 6%	Explore
type I pneumocyte	3 studies	20% ± 1%	Explore
endothelial cell	3 studies	25% ± 10%	Explore
intraepithelial lymphocyte	3 studies	19% ± 1%	Explore
macrophage	3 studies	22% ± 2%	Explore
endothelial cell of lymphatic vessel	3 studies	23% ± 8%	Explore
dendritic cell	3 studies	38% ± 17%	Explore
megakaryocyte-erythroid progenitor cell	3 studies	39% ± 24%	Explore
goblet cell	3 studies	29% ± 8%	Explore
intestinal crypt stem cell	3 studies	23% ± 3%	Explore
secretory cell	3 studies	20% ± 3%	Explore
T-helper 1 cell	3 studies	20% ± 3%	Explore
double negative thymocyte	3 studies	26% ± 13%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	10 studies	22% ± 6%	Explore
kidney	3 studies	19% ± 2%	Explore
lung	3 studies	20% ± 3%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
liver	100%	886.52	226 / 226	100%	97.59	406 / 406
pancreas	100%	458.66	327 / 328	100%	90.01	178 / 178
thymus	100%	1212.90	653 / 653	100%	94.00	602 / 605
brain	100%	661.02	2630 / 2642	100%	60.69	704 / 705
prostate	100%	1172.13	245 / 245	99%	166.25	498 / 502
kidney	100%	1446.10	89 / 89	99%	76.21	890 / 901
breast	100%	922.84	459 / 459	98%	108.12	1099 / 1118
intestine	100%	812.34	966 / 966	97%	93.87	513 / 527
ovary	99%	634.19	178 / 180	98%	73.05	423 / 430
uterus	100%	581.44	170 / 170	96%	78.10	442 / 459
bladder	100%	671.48	21 / 21	95%	102.53	479 / 504
lung	99%	567.83	572 / 578	96%	71.45	1107 / 1155
stomach	100%	693.07	359 / 359	93%	71.76	266 / 286
skin	94%	1102.98	1702 / 1809	98%	76.88	461 / 472
adrenal gland	100%	896.45	258 / 258	91%	45.74	209 / 230
esophagus	100%	569.35	1443 / 1445	84%	33.79	154 / 183
eye	0%	0	0 / 0	100%	118.51	80 / 80
lymph node	0%	0	0 / 0	100%	211.46	29 / 29
spleen	100%	1235.90	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	34.65	1 / 1
adipose	100%	689.15	1202 / 1204	0%	0	0 / 0
muscle	99%	571.45	794 / 803	0%	0	0 / 0
blood vessel	98%	405.89	1307 / 1335	0%	0	0 / 0
tonsil	0%	0	0 / 0	98%	63.79	44 / 45
peripheral blood	96%	952.50	894 / 929	0%	0	0 / 0
heart	95%	371.27	822 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0