TOMM5 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
B cell	20 studies	28% ± 6%	Explore
CD8-positive, alpha-beta T cell	20 studies	33% ± 15%	Explore
CD4-positive, alpha-beta T cell	18 studies	34% ± 17%	Explore
natural killer cell	18 studies	31% ± 13%	Explore
regulatory T cell	16 studies	29% ± 11%	Explore
memory B cell	15 studies	29% ± 9%	Explore
T cell	14 studies	25% ± 5%	Explore
CD16-positive, CD56-dim natural killer cell, human	12 studies	29% ± 7%	Explore
macrophage	12 studies	27% ± 9%	Explore
classical monocyte	12 studies	22% ± 5%	Explore
naive B cell	12 studies	23% ± 5%	Explore
fibroblast	12 studies	26% ± 9%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	11 studies	27% ± 7%	Explore
plasmacytoid dendritic cell	11 studies	28% ± 9%	Explore
gamma-delta T cell	11 studies	28% ± 8%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	10 studies	25% ± 5%	Explore
non-classical monocyte	10 studies	25% ± 7%	Explore
smooth muscle cell	10 studies	26% ± 5%	Explore
pericyte	10 studies	23% ± 7%	Explore
conventional dendritic cell	9 studies	27% ± 14%	Explore
CD8-positive, alpha-beta memory T cell	9 studies	29% ± 10%	Explore
mucosal invariant T cell	9 studies	31% ± 5%	Explore
endothelial cell	9 studies	28% ± 10%	Explore
plasma cell	8 studies	38% ± 15%	Explore
plasmablast	8 studies	46% ± 24%	Explore
CD4-positive, alpha-beta memory T cell	8 studies	28% ± 7%	Explore
ciliated cell	8 studies	30% ± 10%	Explore
epithelial cell	8 studies	36% ± 12%	Explore
CD16-negative, CD56-bright natural killer cell, human	8 studies	29% ± 6%	Explore
endothelial cell of lymphatic vessel	8 studies	32% ± 10%	Explore
mature NK T cell	8 studies	30% ± 6%	Explore
effector CD8-positive, alpha-beta T cell	7 studies	36% ± 13%	Explore
dendritic cell	7 studies	32% ± 12%	Explore
vein endothelial cell	7 studies	31% ± 11%	Explore
endothelial cell of vascular tree	7 studies	26% ± 10%	Explore
basal cell	6 studies	32% ± 4%	Explore
myofibroblast cell	6 studies	27% ± 10%	Explore
myeloid cell	6 studies	24% ± 7%	Explore
T follicular helper cell	6 studies	26% ± 6%	Explore
capillary endothelial cell	5 studies	25% ± 11%	Explore
connective tissue cell	5 studies	25% ± 9%	Explore
abnormal cell	5 studies	32% ± 9%	Explore
effector CD4-positive, alpha-beta T cell	5 studies	31% ± 8%	Explore
endothelial cell of artery	5 studies	27% ± 7%	Explore
effector memory CD8-positive, alpha-beta T cell	5 studies	29% ± 5%	Explore
secretory cell	4 studies	28% ± 10%	Explore
epithelial cell of proximal tubule	4 studies	27% ± 9%	Explore
precursor B cell	4 studies	28% ± 14%	Explore
pro-B cell	4 studies	25% ± 5%	Explore
alveolar macrophage	4 studies	25% ± 9%	Explore
effector memory CD4-positive, alpha-beta T cell	4 studies	33% ± 6%	Explore
erythrocyte	4 studies	42% ± 25%	Explore
mast cell	4 studies	26% ± 2%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	4 studies	25% ± 9%	Explore
hematopoietic precursor cell	3 studies	26% ± 6%	Explore
club cell	3 studies	22% ± 3%	Explore
precursor cell	3 studies	47% ± 6%	Explore
retinal ganglion cell	3 studies	24% ± 9%	Explore
common myeloid progenitor	3 studies	37% ± 10%	Explore
erythroblast	3 studies	47% ± 3%	Explore
hematopoietic stem cell	3 studies	25% ± 2%	Explore
immature B cell	3 studies	26% ± 5%	Explore
mesothelial cell	3 studies	36% ± 13%	Explore
type I pneumocyte	3 studies	26% ± 8%	Explore
type II pneumocyte	3 studies	30% ± 7%	Explore
serous secreting cell	3 studies	26% ± 4%	Explore
germinal center B cell	3 studies	33% ± 13%	Explore
exhausted T cell	3 studies	33% ± 9%	Explore
intermediate monocyte	3 studies	29% ± 6%	Explore
neuron	3 studies	23% ± 6%	Explore
acinar cell	3 studies	39% ± 17%	Explore
pancreatic A cell	3 studies	40% ± 13%	Explore
oligodendrocyte precursor cell	3 studies	23% ± 5%	Explore
group 3 innate lymphoid cell	3 studies	24% ± 5%	Explore
goblet cell	3 studies	20% ± 3%	Explore
T-helper 17 cell	3 studies	40% ± 24%	Explore
T-helper 1 cell	3 studies	35% ± 15%	Explore
double negative thymocyte	3 studies	34% ± 5%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	13 studies	26% ± 6%	Explore
lung	9 studies	25% ± 10%	Explore
kidney	4 studies	23% ± 5%	Explore
lymph node	4 studies	24% ± 3%	Explore
uterus	3 studies	25% ± 7%	Explore
brain	3 studies	32% ± 1%	Explore
pancreas	3 studies	38% ± 16%	Explore
intestine	3 studies	20% ± 2%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
intestine	100%	2249.80	966 / 966	82%	4.03	431 / 527
brain	100%	1813.58	2635 / 2642	80%	1.52	566 / 705
stomach	100%	1682.03	359 / 359	73%	2.92	209 / 286
ovary	100%	1794.06	180 / 180	71%	1.33	306 / 430
uterus	100%	1864.25	170 / 170	65%	1.20	300 / 459
prostate	100%	1792.40	245 / 245	63%	0.97	314 / 502
esophagus	100%	1889.69	1445 / 1445	62%	1.20	114 / 183
adrenal gland	100%	2522.35	258 / 258	61%	1.01	140 / 230
bladder	100%	1983.29	21 / 21	58%	2.18	291 / 504
breast	100%	2099.55	459 / 459	51%	0.87	572 / 1118
lung	100%	1731.31	576 / 578	46%	0.84	526 / 1155
thymus	100%	1960.67	653 / 653	45%	0.66	273 / 605
pancreas	100%	1458.70	328 / 328	45%	0.75	80 / 178
skin	100%	2538.52	1809 / 1809	37%	0.61	176 / 472
kidney	100%	2858.15	89 / 89	30%	0.46	274 / 901
liver	100%	1367.65	226 / 226	20%	0.33	82 / 406
adipose	100%	2269.30	1204 / 1204	0%	0	0 / 0
spleen	100%	2223.65	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	1.80	1 / 1
muscle	100%	2138.77	802 / 803	0%	0	0 / 0
blood vessel	100%	1981.64	1332 / 1335	0%	0	0 / 0
heart	99%	1480.44	850 / 861	0%	0	0 / 0
lymph node	0%	0	0 / 0	72%	1.51	21 / 29
eye	0%	0	0 / 0	56%	0.92	45 / 80
tonsil	0%	0	0 / 0	49%	0.77	22 / 45
peripheral blood	40%	1100.87	369 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0