Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 12 studies | 28% ± 13% | |
peripheral blood | 11 studies | 23% ± 5% | |
kidney | 4 studies | 23% ± 5% | |
brain | 4 studies | 26% ± 4% | |
pancreas | 3 studies | 36% ± 3% | |
placenta | 3 studies | 27% ± 6% | |
uterus | 3 studies | 26% ± 14% | |
lymph node | 3 studies | 24% ± 9% | |
intestine | 3 studies | 25% ± 9% | |
breast | 3 studies | 20% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1024.18 | 1445 / 1445 | 100% | 49.66 | 183 / 183 |
lung | 100% | 1493.71 | 578 / 578 | 100% | 58.26 | 1155 / 1155 |
ovary | 100% | 1093.55 | 180 / 180 | 100% | 121.29 | 430 / 430 |
pancreas | 100% | 918.82 | 328 / 328 | 100% | 49.32 | 178 / 178 |
prostate | 100% | 1332.97 | 245 / 245 | 100% | 74.40 | 502 / 502 |
thymus | 100% | 1663.24 | 653 / 653 | 100% | 61.73 | 604 / 605 |
stomach | 100% | 1149.84 | 359 / 359 | 100% | 66.50 | 285 / 286 |
skin | 100% | 1576.32 | 1809 / 1809 | 100% | 56.58 | 470 / 472 |
kidney | 100% | 1325.92 | 89 / 89 | 100% | 42.65 | 897 / 901 |
breast | 100% | 1591.59 | 459 / 459 | 100% | 61.73 | 1113 / 1118 |
liver | 100% | 905.65 | 226 / 226 | 100% | 39.04 | 404 / 406 |
intestine | 100% | 1226.16 | 966 / 966 | 99% | 61.76 | 524 / 527 |
bladder | 100% | 1206.14 | 21 / 21 | 99% | 58.13 | 500 / 504 |
uterus | 100% | 1262.02 | 170 / 170 | 99% | 43.67 | 454 / 459 |
brain | 98% | 477.21 | 2595 / 2642 | 100% | 38.38 | 705 / 705 |
adrenal gland | 100% | 1645.49 | 258 / 258 | 96% | 30.44 | 220 / 230 |
adipose | 100% | 1441.10 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 58.82 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 39.35 | 29 / 29 |
spleen | 100% | 1408.03 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 41.47 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 27.87 | 1 / 1 |
blood vessel | 100% | 1053.71 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 611.03 | 854 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 1041.06 | 919 / 929 | 0% | 0 | 0 / 0 |
muscle | 97% | 465.03 | 780 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016607 | Cellular component | nuclear speck |
GO_0005730 | Cellular component | nucleolus |
GO_0030667 | Cellular component | secretory granule membrane |
GO_0035577 | Cellular component | azurophil granule membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0101003 | Cellular component | ficolin-1-rich granule membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | TMEM179B |
Protein name | Transmembrane protein 179B |
Synonyms | hCG_2016619 LOC374395 |
Description | |
Accessions | ENST00000333449.9 H0YEV1 ENST00000526546.1 Q7Z7N9 ENST00000533861.5 G3V185 |