SMAP1 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
endothelial cell	23 studies	28% ± 11%	Explore
natural killer cell	19 studies	23% ± 5%	Explore
regulatory T cell	19 studies	22% ± 6%	Explore
CD4-positive, alpha-beta T cell	18 studies	23% ± 7%	Explore
macrophage	17 studies	25% ± 9%	Explore
T cell	15 studies	21% ± 4%	Explore
CD8-positive, alpha-beta T cell	15 studies	22% ± 6%	Explore
non-classical monocyte	13 studies	23% ± 9%	Explore
CD16-positive, CD56-dim natural killer cell, human	12 studies	24% ± 5%	Explore
pericyte	12 studies	21% ± 4%	Explore
gamma-delta T cell	12 studies	24% ± 10%	Explore
classical monocyte	11 studies	22% ± 6%	Explore
glutamatergic neuron	11 studies	48% ± 24%	Explore
CD16-negative, CD56-bright natural killer cell, human	11 studies	24% ± 6%	Explore
oligodendrocyte precursor cell	11 studies	38% ± 15%	Explore
mucosal invariant T cell	11 studies	22% ± 4%	Explore
astrocyte	11 studies	35% ± 16%	Explore
fibroblast	11 studies	22% ± 5%	Explore
GABAergic neuron	10 studies	39% ± 23%	Explore
mature NK T cell	10 studies	21% ± 3%	Explore
microglial cell	10 studies	29% ± 9%	Explore
smooth muscle cell	10 studies	18% ± 1%	Explore
CD8-positive, alpha-beta memory T cell	9 studies	23% ± 6%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	9 studies	21% ± 2%	Explore
neuron	9 studies	36% ± 12%	Explore
epithelial cell	9 studies	35% ± 17%	Explore
type I pneumocyte	9 studies	26% ± 8%	Explore
adipocyte	9 studies	22% ± 6%	Explore
oligodendrocyte	9 studies	27% ± 12%	Explore
mast cell	8 studies	23% ± 8%	Explore
CD4-positive, alpha-beta memory T cell	8 studies	23% ± 5%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	8 studies	22% ± 5%	Explore
effector memory CD8-positive, alpha-beta T cell	8 studies	22% ± 4%	Explore
club cell	7 studies	20% ± 5%	Explore
myofibroblast cell	7 studies	20% ± 4%	Explore
monocyte	6 studies	21% ± 5%	Explore
B cell	6 studies	19% ± 3%	Explore
conventional dendritic cell	6 studies	26% ± 10%	Explore
interneuron	6 studies	47% ± 25%	Explore
retinal ganglion cell	6 studies	37% ± 20%	Explore
retina horizontal cell	6 studies	36% ± 11%	Explore
dendritic cell	6 studies	26% ± 13%	Explore
type II pneumocyte	6 studies	24% ± 6%	Explore
basal cell	5 studies	37% ± 15%	Explore
effector CD8-positive, alpha-beta T cell	5 studies	21% ± 2%	Explore
leukocyte	5 studies	25% ± 5%	Explore
myeloid cell	5 studies	22% ± 7%	Explore
amacrine cell	5 studies	28% ± 11%	Explore
cardiac muscle cell	5 studies	24% ± 3%	Explore
Mueller cell	5 studies	20% ± 4%	Explore
T follicular helper cell	5 studies	19% ± 4%	Explore
innate lymphoid cell	5 studies	25% ± 3%	Explore
endothelial cell of lymphatic vessel	5 studies	24% ± 5%	Explore
goblet cell	5 studies	31% ± 17%	Explore
plasma cell	4 studies	22% ± 10%	Explore
respiratory goblet cell	4 studies	26% ± 6%	Explore
naive B cell	4 studies	19% ± 2%	Explore
exhausted T cell	4 studies	24% ± 6%	Explore
granule cell	4 studies	29% ± 10%	Explore
precursor B cell	4 studies	31% ± 4%	Explore
retinal rod cell	4 studies	21% ± 3%	Explore
ciliated cell	4 studies	30% ± 14%	Explore
lymphocyte	4 studies	31% ± 8%	Explore
effector CD4-positive, alpha-beta T cell	4 studies	26% ± 4%	Explore
effector memory CD4-positive, alpha-beta T cell	4 studies	30% ± 5%	Explore
abnormal cell	4 studies	24% ± 8%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	4 studies	20% ± 4%	Explore
squamous epithelial cell	3 studies	30% ± 18%	Explore
pancreatic A cell	3 studies	27% ± 3%	Explore
type B pancreatic cell	3 studies	32% ± 7%	Explore
hematopoietic precursor cell	3 studies	21% ± 6%	Explore
plasmablast	3 studies	36% ± 14%	Explore
GABAergic interneuron	3 studies	33% ± 3%	Explore
progenitor cell	3 studies	18% ± 1%	Explore
capillary endothelial cell	3 studies	19% ± 2%	Explore
immature B cell	3 studies	21% ± 4%	Explore
retinal cone cell	3 studies	31% ± 7%	Explore
endothelial cell of artery	3 studies	17% ± 0%	Explore
mononuclear phagocyte	3 studies	24% ± 6%	Explore
GABAergic amacrine cell	3 studies	30% ± 10%	Explore
OFF-bipolar cell	3 studies	24% ± 4%	Explore
ON-bipolar cell	3 studies	21% ± 4%	Explore
glycinergic amacrine cell	3 studies	24% ± 4%	Explore
rod bipolar cell	3 studies	24% ± 4%	Explore
endothelial cell of vascular tree	3 studies	25% ± 13%	Explore
intermediate monocyte	3 studies	29% ± 14%	Explore
mesothelial cell	3 studies	18% ± 2%	Explore
hepatocyte	3 studies	36% ± 18%	Explore
muscle cell	3 studies	26% ± 10%	Explore
connective tissue cell	3 studies	18% ± 2%	Explore
enteroendocrine cell	3 studies	26% ± 9%	Explore
alveolar macrophage	3 studies	26% ± 9%	Explore
group 3 innate lymphoid cell	3 studies	43% ± 13%	Explore
T-helper 17 cell	3 studies	18% ± 1%	Explore
T-helper 1 cell	3 studies	20% ± 5%	Explore
plasmacytoid dendritic cell	3 studies	24% ± 8%	Explore
double negative thymocyte	3 studies	32% ± 8%	Explore
memory B cell	3 studies	16% ± 0%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
brain	16 studies	35% ± 20%	Explore
peripheral blood	11 studies	23% ± 6%	Explore
lung	11 studies	22% ± 11%	Explore
eye	8 studies	23% ± 8%	Explore
kidney	4 studies	19% ± 0%	Explore
liver	4 studies	26% ± 9%	Explore
intestine	4 studies	21% ± 7%	Explore
adipose	4 studies	20% ± 2%	Explore
pancreas	3 studies	29% ± 4%	Explore
bone marrow	3 studies	18% ± 1%	Explore
heart	3 studies	20% ± 1%	Explore
lymph node	3 studies	16% ± 1%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	467.76	1442 / 1445	100%	12.05	183 / 183
stomach	100%	411.96	358 / 359	100%	11.68	285 / 286
ovary	100%	272.95	180 / 180	99%	8.62	424 / 430
lung	99%	351.51	575 / 578	98%	7.82	1130 / 1155
brain	99%	358.73	2605 / 2642	98%	10.57	691 / 705
intestine	100%	437.11	966 / 966	95%	9.19	502 / 527
breast	100%	399.48	459 / 459	94%	6.62	1046 / 1118
pancreas	100%	383.84	328 / 328	93%	5.23	165 / 178
prostate	100%	320.18	244 / 245	91%	6.68	458 / 502
thymus	100%	328.15	651 / 653	87%	5.38	526 / 605
bladder	100%	401.24	21 / 21	87%	5.47	436 / 504
skin	100%	490.21	1806 / 1809	87%	4.65	409 / 472
kidney	100%	244.83	89 / 89	82%	4.50	740 / 901
uterus	100%	337.42	170 / 170	81%	5.22	373 / 459
adrenal gland	98%	348.07	253 / 258	69%	3.30	159 / 230
liver	79%	126.85	178 / 226	51%	2.21	208 / 406
adipose	100%	452.09	1204 / 1204	0%	0	0 / 0
muscle	100%	669.23	803 / 803	0%	0	0 / 0
spleen	100%	213.17	241 / 241	0%	0	0 / 0
blood vessel	100%	470.90	1334 / 1335	0%	0	0 / 0
peripheral blood	96%	363.40	888 / 929	0%	0	0 / 0
heart	91%	311.20	782 / 861	0%	0	0 / 0
tonsil	0%	0	0 / 0	87%	5.93	39 / 45
lymph node	0%	0	0 / 0	59%	3.26	17 / 29
eye	0%	0	0 / 0	57%	2.11	46 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

IV. Literature review

[source]

Gene name	SMAP1
Protein name	Small ArfGAP 1 Alternative protein SMAP1 Stromal membrane-associated protein 1
Synonyms
Description	FUNCTION: GTPase activating protein that acts on ARF6. Plays a role in clathrin-dependent endocytosis. May play a role in erythropoiesis (By similarity). .
Accessions	ENST00000619054.4 ENST00000370452.7 [Q8IYB5-3] A0A087X1X9 ENST00000370455.8 [Q8IYB5-1] ENST00000445046.1 L0R5C9 ENST00000316999.9 [Q8IYB5-2] ENST00000439432.1 H0Y5G0 Q8IYB5 Q5T6I8

GO_0045648	Biological process	positive regulation of erythrocyte differentiation
GO_2000369	Biological process	regulation of clathrin-dependent endocytosis
GO_0005737	Cellular component	cytoplasm
GO_0005886	Cellular component	plasma membrane
GO_0030276	Molecular function	clathrin binding
GO_0046872	Molecular function	metal ion binding
GO_0005096	Molecular function	GTPase activator activity

SMAP1 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review