Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 1964.53 | 459 / 459 | 100% | 37.17 | 1118 / 1118 |
esophagus | 100% | 1868.52 | 1445 / 1445 | 100% | 32.40 | 183 / 183 |
lung | 100% | 1642.81 | 578 / 578 | 100% | 32.08 | 1155 / 1155 |
ovary | 100% | 1566.43 | 180 / 180 | 100% | 27.39 | 430 / 430 |
thymus | 100% | 1795.39 | 653 / 653 | 100% | 40.04 | 605 / 605 |
uterus | 100% | 1887.22 | 170 / 170 | 100% | 40.95 | 459 / 459 |
brain | 100% | 1372.59 | 2639 / 2642 | 100% | 31.78 | 705 / 705 |
prostate | 100% | 1696.01 | 245 / 245 | 100% | 29.26 | 501 / 502 |
kidney | 100% | 1493.01 | 89 / 89 | 100% | 29.25 | 899 / 901 |
bladder | 100% | 1741.14 | 21 / 21 | 100% | 37.81 | 502 / 504 |
adrenal gland | 100% | 1621.50 | 258 / 258 | 100% | 31.34 | 229 / 230 |
stomach | 100% | 1317.00 | 359 / 359 | 99% | 39.09 | 284 / 286 |
pancreas | 100% | 758.68 | 327 / 328 | 99% | 32.64 | 177 / 178 |
liver | 100% | 941.65 | 226 / 226 | 99% | 18.45 | 402 / 406 |
intestine | 100% | 1852.07 | 966 / 966 | 99% | 41.92 | 521 / 527 |
skin | 100% | 1790.36 | 1809 / 1809 | 98% | 33.54 | 463 / 472 |
adipose | 100% | 1932.06 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1898.27 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 36.16 | 29 / 29 |
muscle | 100% | 1523.94 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1701.27 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 31.61 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 20.31 | 1 / 1 |
heart | 100% | 1346.22 | 859 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 95% | 18.75 | 76 / 80 |
peripheral blood | 87% | 959.67 | 805 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0051123 | Biological process | RNA polymerase II preinitiation complex assembly |
GO_0006366 | Biological process | transcription by RNA polymerase II |
GO_0060261 | Biological process | positive regulation of transcription initiation by RNA polymerase II |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_0032968 | Biological process | positive regulation of transcription elongation by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0016592 | Cellular component | mediator complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0070847 | Cellular component | core mediator complex |
GO_0016020 | Cellular component | membrane |
GO_0005634 | Cellular component | nucleus |
GO_0046966 | Molecular function | nuclear thyroid hormone receptor binding |
GO_0003713 | Molecular function | transcription coactivator activity |
GO_0042809 | Molecular function | nuclear vitamin D receptor binding |
GO_0030374 | Molecular function | nuclear receptor coactivator activity |
GO_0005515 | Molecular function | protein binding |
GO_0003712 | Molecular function | transcription coregulator activity |
Gene name | MED4 |
Protein name | Mediator of RNA polymerase II transcription subunit 4 (Activator-recruited cofactor 36 kDa component) (ARC36) (Mediator complex subunit 4) (TRAP/SMCC/PC2 subunit p36 subunit) (Vitamin D3 receptor-interacting protein complex 36 kDa component) (DRIP36) Mediator of RNA polymerase II transcription subunit 4 (Mediator complex subunit 4) |
Synonyms | DRIP36 HSPC126 VDRIP ARC36 |
Description | FUNCTION: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. FUNCTION: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. . FUNCTION: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. . FUNCTION: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. . |
Accessions | A0A087X0U0 ENST00000417167.2 Q9NPJ6 ENST00000378586.5 [Q9NPJ6-2] ENST00000495013.5 ENST00000258648.7 [Q9NPJ6-1] Q5T911 U4PSC4 |