Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 20 studies | 72% ± 16% | |
lung | 15 studies | 39% ± 12% | |
bone marrow | 7 studies | 38% ± 20% | |
intestine | 5 studies | 31% ± 11% | |
lymph node | 5 studies | 61% ± 16% | |
placenta | 5 studies | 26% ± 6% | |
breast | 4 studies | 36% ± 13% | |
liver | 4 studies | 39% ± 15% | |
pancreas | 3 studies | 28% ± 10% | |
kidney | 3 studies | 58% ± 20% | |
brain | 3 studies | 39% ± 13% | |
uterus | 3 studies | 38% ± 17% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
skin | 100% | 5378.06 | 1802 / 1809 | 97% | 354.92 | 460 / 472 |
breast | 100% | 6385.34 | 459 / 459 | 97% | 130.74 | 1085 / 1118 |
esophagus | 99% | 2961.69 | 1425 / 1445 | 98% | 130.58 | 180 / 183 |
lung | 100% | 5619.49 | 578 / 578 | 95% | 115.62 | 1103 / 1155 |
thymus | 98% | 2337.95 | 643 / 653 | 96% | 123.17 | 578 / 605 |
bladder | 100% | 3861.24 | 21 / 21 | 93% | 159.19 | 470 / 504 |
uterus | 100% | 3877.09 | 170 / 170 | 93% | 132.07 | 425 / 459 |
intestine | 94% | 2432.72 | 904 / 966 | 98% | 149.24 | 516 / 527 |
stomach | 85% | 1761.69 | 306 / 359 | 98% | 162.87 | 280 / 286 |
prostate | 96% | 2618.52 | 235 / 245 | 54% | 21.90 | 270 / 502 |
kidney | 64% | 1198.52 | 57 / 89 | 83% | 77.02 | 752 / 901 |
ovary | 44% | 707.82 | 79 / 180 | 91% | 88.60 | 392 / 430 |
adrenal gland | 76% | 1183.34 | 196 / 258 | 48% | 45.47 | 110 / 230 |
pancreas | 20% | 273.91 | 66 / 328 | 98% | 233.48 | 174 / 178 |
adipose | 100% | 6982.89 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 196.31 | 29 / 29 |
peripheral blood | 100% | 13255.67 | 929 / 929 | 0% | 0 | 0 / 0 |
spleen | 100% | 8575.49 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 58.05 | 1 / 1 |
blood vessel | 99% | 4788.35 | 1317 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 93.07 | 43 / 45 |
eye | 0% | 0 | 0 / 0 | 94% | 161.47 | 75 / 80 |
heart | 85% | 1714.71 | 728 / 861 | 0% | 0 | 0 / 0 |
brain | 18% | 258.38 | 485 / 2642 | 50% | 25.04 | 353 / 705 |
liver | 18% | 290.23 | 41 / 226 | 45% | 34.07 | 181 / 406 |
muscle | 18% | 234.45 | 146 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0030033 | Biological process | microvillus assembly |
GO_0043269 | Biological process | regulation of monoatomic ion transport |
GO_2000649 | Biological process | regulation of sodium ion transmembrane transporter activity |
GO_0006813 | Biological process | potassium ion transport |
GO_0006814 | Biological process | sodium ion transport |
GO_0046588 | Biological process | negative regulation of calcium-dependent cell-cell adhesion |
GO_0016323 | Cellular component | basolateral plasma membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0045296 | Molecular function | cadherin binding |
GO_0017080 | Molecular function | sodium channel regulator activity |
GO_0005515 | Molecular function | protein binding |
GO_0003779 | Molecular function | actin binding |
Gene name | FXYD5 |
Protein name | FXYD domain-containing ion transport regulator 5 (Dysadherin) FXYD domain containing ion transport regulator 5 FXYD domain-containing ion transport regulator |
Synonyms | DYSAD IWU1 HSPC113 UNQ2561/PRO6241 |
Description | FUNCTION: Involved in down-regulation of E-cadherin which results in reduced cell adhesion. Promotes metastasis. . |
Accessions | ENST00000392217.3 [Q96DB9-2] ENST00000592290.5 ENST00000392219.7 [Q96DB9-1] F5H4X8 ENST00000342879.7 [Q96DB9-1] Q96DB9 ENST00000590686.5 [Q96DB9-1] ENST00000543307.5 ENST00000588699.5 ENST00000423817.7 [Q96DB9-1] A8MVG1 ENST00000496493.5 ENST00000392218.6 K7EJH6 K7ER99 ENST00000541435.6 [Q96DB9-1] |